Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0935 ATGTTTTGCGGACTCTGTATTTCTGAGAGAGAAAAAAGATCGGATTGTTGGAGATTTGAGTGTGTGATTTTGGAAAGTAGTTATGGAAGTGTTTTGGAAATTAGTTTCTGGGTGAAGATTAGTATGGTGGTAATGACATCGGCTTCTCCTTCTCCCAATTCTTCTCCCTCTGCAGTGCCACCAATTTCTGCAAATAACACAAGACCACCACCTTCTTCACCTTCATCAACAAATTCTTCTAAGATCCCTCCTCCTTCAGCTACACCTCCTGCTCAGGCAGTGCCTTCAACCCCGCTTCCTTCTCCGTCTCTTTCTCCTCCGCCGTCACCACCAGATTCTCCACCTGCATCTCCTCCACCTTCAGCTGCCACAGCCCCTGCTTCAAATTCAACCTCACCAACCCCTCCTAGTTTATCCCCACCACCTCCATTGGCTGCTTCACCACCAGATCCTTCACCTCCTGCTGCAAAAAATCCTCCCCCGTCACCTATTCCTCCAATTCTTCCTCCTCCAGCAAATAACTCAACACCATCATCGCCTGGTAAGCCTTCTCCATCACGGGGAAAGCCACCGGAAAGTACTCCTTTGCGCCCTTCACATGCACCACCTCCATCAGTTTCTAAGTCTCCTCCCTCCACAAATGCTGCCCCTCCTTCCAAAACGCCTTCAGCTCCTTCAGTCCCTCCTCCAAAGTCTTCGCATTCTTCTCCACACAATGCATCTGCAGCTAACAGGCCCCCTGCACCCCTACCCTCTTTTCCAACAGCGTCACCAACTGGTAAAACATCCAATCATAGAAATACATCTGCAGACGGCGCACCTTCACCGTCAGGAGGGTCAAATATTGGACTACTCCCAGTTATTGGCATTATATTTGGCTTTGTTGTCCTCAGCCTTCTTGTTATGGTGATGTGGTGTGTATGGAAGCGGAAGAGGAAGGAAGCAAGATCGAAAGTTGGTTATACTATGCCTTCCCCGTATGCCTCATCTCATAACTCAGGCACAACGATCTTAAGGCAACAGTCTTCCCTTTCTTATAATGGCTATGGTAGTGATTTCGCGTATTCACCATCAGATCCAGGTGGACTAAGTGGTTCAAGATCGTGGTTTACATATGAAGAACTTGTCCAAGCAACAAATGGGTTTTCAGCACAAAATCTGTTGGGTGAAGGTGGATTTGGTTGTGTTTACAAAGGTTTTCTCATGGATGGAAGAGCGGTAGCTGTGAAACAGCTCAAAGATGGAGGTGGGCAAGGGGAGCGTGAGTTTAGAGCAGAAGTTGAAATTATTAGCCGAGTACATCATCGCCACCTTGTTTCCTTGGTCGGCTACTGTATAACTGAGCATCAGAGATTGCTTGTCTATGACTATGTTCCCAACAATACCCTTCATTACCATCTCCACGGTCAAAACGGGCCAGTTATGAATTGGGCTACAAGAGTGAAGGTTGCAGTTGGCGCAGCTCGTGGAATAGCTTATCTACATGAAGACTGCCATCCACGCATTATTCACCGAGACATAAAGTCATCAAACATCCTTCTTGATAACAACTTTGAAGCTCAAGTTTCCGACTTTGGGCTTGCAAAATTAGCAATGGATTCATTTACACACGTAACCACACGAGTGATGGGGACCTTTGGGTACATGGCACCAGAATATGCAACAAGTGGTAAACTGTCTGAAAAGTCGGATGTTTATTCATTCGGGGTTGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCCTCTCAGCCCACTGGTGATGAGAGCCTGATTGAATGGGCTCGACCTCTATTGAATCGAGTGCTTGAAAATGAAGACTATGATATACTGGTAGATCCACGACTCGAGAAGAACTATAATAGAAATGAAATGTTTCGAATGATAGAGGCCGCGGCTGCCTGTGTGCGTCACTCTGCAGCAAAAAGACCACGAATGAGTCAGGTCGCAAGAGCTATGGATTCCATAGATGAGTTTTCAGATCTCTGTAATGGAATAAAACCTGGCCAGAGTACAACCTTTAACCCTTCACCGCCATCTGCACAAGTCCGAATGTTTCAAAGAATGGTTTTCGGTGGGGCCAGTCAAGATTTCAGTTCCAGTTTCTTTAAGGATTCTCGGAGTAGCTGGAGAAGCAGAGACCAGGAGGACTCAAAACACCATGATCTCCCAAAATAA 2184 0.4652 MFCGLCISEREKRSDCWRFECVILESSYGSVLEISFWVKISMVVMTSASPSPNSSPSAVPPISANNTRPPPSSPSSTNSSKIPPPSATPPAQAVPSTPLPSPSLSPPPSPPDSPPASPPPSAATAPASNSTSPTPPSLSPPPPLAASPPDPSPPAAKNPPPSPIPPILPPPANNSTPSSPGKPSPSRGKPPESTPLRPSHAPPPSVSKSPPSTNAAPPSKTPSAPSVPPPKSSHSSPHNASAANRPPAPLPSFPTASPTGKTSNHRNTSADGAPSPSGGSNIGLLPVIGIIFGFVVLSLLVMVMWCVWKRKRKEARSKVGYTMPSPYASSHNSGTTILRQQSSLSYNGYGSDFAYSPSDPGGLSGSRSWFTYEELVQATNGFSAQNLLGEGGFGCVYKGFLMDGRAVAVKQLKDGGGQGEREFRAEVEIISRVHHRHLVSLVGYCITEHQRLLVYDYVPNNTLHYHLHGQNGPVMNWATRVKVAVGAARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLAMDSFTHVTTRVMGTFGYMAPEYATSGKLSEKSDVYSFGVVLLELITGRKPVDASQPTGDESLIEWARPLLNRVLENEDYDILVDPRLEKNYNRNEMFRMIEAAAACVRHSAAKRPRMSQVARAMDSIDEFSDLCNGIKPGQSTTFNPSPPSAQVRMFQRMVFGGASQDFSSSFFKDSRSSWRSRDQEDSKHHDLPK 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0935 727 Gene3D Phosphorylase Kinase; domain 1 362 457 - -
Lele45g0935 727 SUPERFAMILY Protein kinase-like (PK-like) 361 653 IPR011009 -
Lele45g0935 727 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 295 697 - -
Lele45g0935 727 MobiDBLite consensus disorder prediction 255 276 - -
Lele45g0935 727 MobiDBLite consensus disorder prediction 133 232 - -
Lele45g0935 727 Gene3D Transferase(Phosphotransferase) domain 1 458 666 - -
Lele45g0935 727 FunFam proline-rich receptor-like protein kinase PERK8 458 670 - -
Lele45g0935 727 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Lele45g0935 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Lele45g0935 727 MobiDBLite consensus disorder prediction 47 277 - -
Lele45g0935 727 MobiDBLite consensus disorder prediction 699 727 - -
Lele45g0935 727 ProSiteProfiles Protein kinase domain profile. 382 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0935 727 FunFam Proline-rich receptor-like protein kinase PERK8 355 457 - -
Lele45g0935 727 MobiDBLite consensus disorder prediction 83 122 - -
Lele45g0935 727 MobiDBLite consensus disorder prediction 709 727 - -
Lele45g0935 727 Pfam Protein tyrosine and serine/threonine kinase 385 653 IPR001245 GO:0004672|GO:0006468
Lele45g0935 727 MobiDBLite consensus disorder prediction 47 62 - -
Lele45g0935 727 SMART serkin_6 382 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0935 Lele-ChrLele45 20104274 20109324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0935 254 717 Trihelix Transcription Factor Family AT5G38560 67.368 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele45g0935 PK_Tyr_Ser-Thr 1.5e-46 CL0016