Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0925 ATGCACCTATCGAAACAGAGTACACTTGAGGAAGAAATTGGAATTGATGATAACACGTGCACATTGTGTGGAATGGAGAACCTTTTCTTTGAACCAGTGCCAATCTATTGCATATCTTGTGGGAAGCGCATCAGAAGAAAAGCAAATTTTTACTATAGAAGAGCAGAAGAGAATGATACAGGACAGTGCTTTTGCACCACTTGTTTCAAAAATTCTCGAGGTGAATCTATCCAATTCAATGGAGCATATTTTCCCAAGAAAATATTTGATTGTAGGAAAACCGATAGTTGGGCGCAATGTGATAAATGTAAGAGGTGGCAACATCAGATATGTGCACTCTTCAACGGTAAGAGAAATACAGAAGGCGAATTTCCGTATGTGTGTCCCACATGCCGCTCAAAGGAAATTGAAGAAGGAAATAGCAAACCCTTAGGGACTGCTATTTTTGGTGCTAAGGACTTGCCAAGGACCAAGCTTAGCGACCATATAGAGCAAAGAATCTTTTCGCGTCTTGAACATGAGAGAGCGCACAAGGCAAAAATTGAAGGAAAGAATGTTAATGAGATTTCTGGAGCAGAAAATCTTACTGTAAGGGTGGTGCTATCAGTTGAAAAGCAATTGAAAGTGAAAAAGGAGTTTCTTGACATCCTATCTGGGGAGACTTACCCTCCACAGTTCCCATACACGTCAAAAGTTATTCTGTTGTTCCAGAACATTGAGGGAGTAGATGTGTGTATCTATGTTATTTTTGTCCAGGAATTCGGCTCAGAATGTGATCGCCCAAATCATCGTTCTGTGTACATCTCATATCTTGATTCAGTCAAGTATTTTAGGCCTGAAAGAGAGACTGTGACTGGGGAAGCTCTTCGTACATTTGTGTATCATGAAATATTGATTGGATACCTTGAATTTTGCAAGAAACGAGGTTTCGAAAAATGTTACATATGGGCATGTCCTCCTCCAAAAGGGGAAGATTATGTGCTATATTGCCATCCTCAGAGCCAGAAAACTCCAAAAAATGATAAACTAAGACACTGGTATCATTCAGTGTTAAGAAAGGCTGCTGCACAAAACATTGTAGTTGGTTTGACGAATGTCTATGATCAGTTCTTTGTTACCGCTCAAAGAAGAGACTCATACAAGGTGACGGCTGCTCGTTTGCCATACTTTGATGGAGACTACTGGTCTGGTGCTGCTATGGATGAAATCAAGAAAATTGAACAAGAGAGTAAAGCAGAGTCAGGCAAAAAGTTGAAACAAGTATTGACCAAAAGAGCTCTAAAGTCAATGGGACATACAAACCCTTCAAAAGACGTTTTGGTGATGCAAAAATTGGGCCAAACCATATTACCCGTCAAGGAAAACTTCATCATAATCCAGTTGCAGTATGCATGCACGCTTTGTCATGAGGTGATATTGTCTGGAAAGCGATGGTTTTGCACTGAGTGCAAGAAATACCAGCAGTGTGAAAGATGCCACACTTCTGACACACATACTTCAATTAGTGGGGAGAAGCATACTCTGTGCCAGGTTGTCGTGGATGACATCCCCAGTGATACTAAGGAGAATGATATCGTCCTGGGCAATGATTTATTTCAGAATAGGGTTGATTTTGTTGATTTCTTCCAACAGAATCTGCTTCAGTTTGATACACTCCGTCGTGCCAAGCATTCCTCAATGATGCTTCTCTATCATCTCAAGAGTTCTGCTTCGCATAATATGGATTCAAGATGCAGCATTTGCCGTAAAGATAATGTTTCCCAGCTGAGCTGGCAATGTGATTTTTGTCCACAGTTGTCCATCTGCTCAGCATGCTATGAGGAAAAAGGTGCTAATTGCCATGAGCATGAGTTAAGACAATGTTCTTCCACAGCTCATTGTCTGTCAGAGAATCAAGGGTTAGAGCAGAAAACTACCATGAGACAGAAACTTCTGAAAGCTCTAAGACACGCATCTCAATGTAACTCAACCATAAGTCAACCATGCTCTTATCCAAACTGTCTTCTGATCAAAAAGCTGTTTTCCCATGCAAGCAAGTGCACTGTTAAAGCACGTGGGGGTTGCCAACACTGTAAGAAGGCATGGACGTTGTTGAGTCTTCACTCGAAGAATTGCAAAGACTCTGAGTGTCACATCCCAAGATGCAATGATATGAAGAATTATGCAGAATGGTTAGCACAGCAACATGAATCTCAGAGACGAGTTGCAGTTTTAGGATCAGCAAGAGACATAGCAATGGAGGTCGCTGCTGAAACATTTCTGGAACAACGTTGCTGTGCTTATAATGATTCTTGTCTGAATAAGGTCTTGATGAAGTGGAAGAGGACCGTCTGGCACTTTAACATAAACTCACATTTCAGAGAAAAGATTCTAAAACATTTTGATACAACAATCAATATTTCAATGGAGGAGGAAGCTAACTTTCCACTCTAA 2433 0.4077 MHLSKQSTLEEEIGIDDNTCTLCGMENLFFEPVPIYCISCGKRIRRKANFYYRRAEENDTGQCFCTTCFKNSRGESIQFNGAYFPKKIFDCRKTDSWAQCDKCKRWQHQICALFNGKRNTEGEFPYVCPTCRSKEIEEGNSKPLGTAIFGAKDLPRTKLSDHIEQRIFSRLEHERAHKAKIEGKNVNEISGAENLTVRVVLSVEKQLKVKKEFLDILSGETYPPQFPYTSKVILLFQNIEGVDVCIYVIFVQEFGSECDRPNHRSVYISYLDSVKYFRPERETVTGEALRTFVYHEILIGYLEFCKKRGFEKCYIWACPPPKGEDYVLYCHPQSQKTPKNDKLRHWYHSVLRKAAAQNIVVGLTNVYDQFFVTAQRRDSYKVTAARLPYFDGDYWSGAAMDEIKKIEQESKAESGKKLKQVLTKRALKSMGHTNPSKDVLVMQKLGQTILPVKENFIIIQLQYACTLCHEVILSGKRWFCTECKKYQQCERCHTSDTHTSISGEKHTLCQVVVDDIPSDTKENDIVLGNDLFQNRVDFVDFFQQNLLQFDTLRRAKHSSMMLLYHLKSSASHNMDSRCSICRKDNVSQLSWQCDFCPQLSICSACYEEKGANCHEHELRQCSSTAHCLSENQGLEQKTTMRQKLLKALRHASQCNSTISQPCSYPNCLLIKKLFSHASKCTVKARGGCQHCKKAWTLLSLHSKNCKDSECHIPRCNDMKNYAEWLAQQHESQRRVAVLGSARDIAMEVAAETFLEQRCCAYNDSCLNKVLMKWKRTVWHFNINSHFREKILKHFDTTINISMEEEANFPL 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0925 810 Pfam TAZ zinc finger 642 715 IPR000197 -
Lele45g0925 810 SUPERFAMILY RING/U-box 555 617 - -
Lele45g0925 810 ProSiteProfiles Zinc finger TAZ-type profile. 633 718 IPR000197 -
Lele45g0925 810 PANTHER CBP/P300-RELATED 12 739 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele45g0925 810 SUPERFAMILY FYVE/PHD zinc finger 90 135 IPR011011 -
Lele45g0925 810 Pfam Histone acetylation protein 190 401 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele45g0925 810 SMART PHD_3 64 132 IPR001965 -
Lele45g0925 810 Gene3D TAZ domain 629 742 IPR035898 -
Lele45g0925 810 SUPERFAMILY TAZ domain 636 718 IPR035898 -
Lele45g0925 810 SUPERFAMILY RING/U-box 440 502 - -
Lele45g0925 810 Gene3D - 459 509 IPR043145 -
Lele45g0925 810 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 148 571 IPR031162 GO:0004402
Lele45g0925 810 SMART TAZ_2 635 716 IPR000197 -
Lele45g0925 810 ProSiteProfiles Zinc finger PHD-type profile. 62 134 IPR019787 -
Lele45g0925 810 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 135 IPR013083 -
Lele45g0925 810 SMART KAT11_2 181 472 IPR013178 GO:0004402|GO:0006355|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0925 Lele-ChrLele45 19994672 20002161 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lele45g0925 HAT_KAT11 8.4e-28 CL0257