Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele45g0910 | ATGGTTGCCGCCAAGAAAACAAAGAAGACCCATGAGAGTATCAATAACAGGCTCGCTCTTGTGATGAAGAGCGGAAAATATACCCTGGGTTATAAAACGGTTCTGAAGTCCCTTAGGAACTCTAAAGGGAAACTGATTATTATTGCCAACAACTGCCCACCTTTGAGGAAGTCAGAAATAGAATACTACGCTATGTTGGCGAAGGTTGGAGTTCATCATTACAATGGGAACAACGTTGATTTGGGCACTGCTTGCGGCAAGTATTTCAGAGTGTGCTGTCTCAGCATCGTCGATCCTGGTGATTCTGACATCATTAAGACCATGCCTGGCGATCAGTAG | 339 | 0.4454 | MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIVDPGDSDIIKTMPGDQ | 112 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele45g0910 | 112 | PANTHER | RIBOSOMAL PROTEIN L30 | 1 | 110 | IPR039109 | GO:0003723 | |
Lele45g0910 | 112 | SUPERFAMILY | L30e-like | 13 | 107 | IPR029064 | - | |
Lele45g0910 | 112 | ProSitePatterns | Ribosomal protein L30e signature 1. | 24 | 48 | IPR022991 | - | |
Lele45g0910 | 112 | Hamap | 50S ribosomal protein L30e [rpl30e]. | 12 | 109 | IPR000231 | GO:0003723|GO:0003735|GO:0022625 | |
Lele45g0910 | 112 | Gene3D | - | 2 | 108 | IPR029064 | - | |
Lele45g0910 | 112 | FunFam | 60S ribosomal protein L30 | 2 | 108 | - | - | |
Lele45g0910 | 112 | ProSitePatterns | Ribosomal protein L30e signature 2. | 80 | 100 | IPR022991 | - | |
Lele45g0910 | 112 | Pfam | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 13 | 105 | IPR004038 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele45g0910 | Lele-ChrLele45 | 19817703 | 19819955 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele45g0910 | 1 | 112 | Cytoplasmic Ribosomal Protein Gene Family | AT1G36240 | 88.393 | 8.60e-73 | 210 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele45g0910 | 45 | 19817703 | 19819955 | Lele47g0484 | 47 | 3835170 | 3837347 | hybridization |