Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0906 ATGAGCTGTAATGGATGTCGTGTTCTCCGAAAAGGTTGCAGTGAGAATTGTAGCATCAGACCTTGCTTGCAGTGGATCAAATCCCCTGAATCTCAAGCTAACGCAACTGTTTTTCTTGCAAAGTTCTATGGCCGTGCCGGCCTCTTGAACCTCATCAACGCTGGCCCTCAACACCTTCGTCCTGCTATTTTTCGGTCTCTGCTTTACGAAGCATGCGGGCGGATACTTAACCCGATTTATGGGTCCGTGGGTCTGTTATGGTCCGGAGACTGGCAGCGTGGTCAGGCCGCCGTGGAGGCGGTGCTGAAGGGTAATCCGATCACTCCGATCAACTCGGAAGCCGCCGTGAGTGGGCAGGGTCCACCGTTGAAGCCTTACGACATACGTCATGTGTGCAAGGACAAGAACTCGACCGAGTCGAACGATGGCCAGCAAGTTAAGCCTCGGTCACGGTTCAAGCGATCCGCCGGGAAGACCAAGAAGGCGAACAAGGGGACCAAGTTGAAGTCCGCTGAACTGGAAGAACCGCGCAGTGGATGCACTGTGTGTTGTGCAGCCGTTGATGAGGTGGCGAACCGGTCCGCAAGCCATGAATCGTCGCTGAGTCAACTGTCGGAGGAGGTGCCGCCGAAGCCGGCGGCAGAAGGGGATAGCAAAGGCAGCGAGAGCACGGTGTCGGTGGAGACCGCCGAGATTTCTATTCTCTCCAGGGACGAACCGGAATCAACACCAAAACAGAGCGAGCGAGCCGATGGGGCCGAATTGGGGCTGGAGCTGACGCTGGGGTTCAAACCGGTTGCAAGTGAGGCTCACGTGATGCCGGTGAAGAAAAGAAAGATAGAATTTCAATTTCAAGAAGAGTCGGCTAATAAGAAAGTAGCAAGCATGAAGCTGGGGCTGGAATGCTCGGCTTGA 915 0.5497 MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLLNLINAGPQHLRPAIFRSLLYEACGRILNPIYGSVGLLWSGDWQRGQAAVEAVLKGNPITPINSEAAVSGQGPPLKPYDIRHVCKDKNSTESNDGQQVKPRSRFKRSAGKTKKANKGTKLKSAELEEPRSGCTVCCAAVDEVANRSASHESSLSQLSEEVPPKPAAEGDSKGSESTVSVETAEISILSRDEPESTPKQSERADGAELGLELTLGFKPVASEAHVMPVKKRKIEFQFQEESANKKVASMKLGLECSA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0906 304 PIRSF AS2 1 303 IPR017414 -
Lele45g0906 304 MobiDBLite consensus disorder prediction 195 253 - -
Lele45g0906 304 MobiDBLite consensus disorder prediction 134 172 - -
Lele45g0906 304 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Lele45g0906 304 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 261 - -
Lele45g0906 304 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0906 Lele-ChrLele45 19795937 19796943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0906 1 280 AS2 family AT3G02550 56.429 6.87e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele45g0906 LOB 5.4e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0906 45 19795937 19796943 Lele46g0987 46 17693287 17694320 ECH
Lele45g0906 45 19795937 19796943 Lele45g0906 45 19795937 19796943 ECH
Lele45g0906 45 19795937 19796943 Lele47g0488 47 3862704 3863737 hybridization
Lele45g0906 45 19795937 19796943 Lele48g0508 48 4867615 4868648 hybridization