Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0861 ATGGGTAAGAGGTTGCAGAAACTAGCCATTGGAATCGATCTTGGAACCACATACTCGTGTGTTGCAGTATGGCAACACGGTCGAGCAGAGATCATTGTGAACGATCAAGGCAATAGAACCACCCCATCTTATGTTGCCTTCACTGATACTGAAAGAATGGTAGGTGACGCTGCCAAGAACATGGCTGCACATAACCCTACTAACACTGTCTTTGATGCAAAAAGATTAATTGGTCGGAAATTTGGTGATTCCCATGTTCTGAGTGATAGGAACCTTTGGCCATTTAAGATCATTTGTGGTGAAGGTGATAAGCCCAAAATTGTTGTAAATTTTAAATCACAGGAAAAACAGTTTCTAGCAGAAGAAATATCATCCATGATATTAGCAAAGATGCGTGAGATTGCAGAGGCATATCTTGGTTCAACAGTTGAGAATGCGGTTGTTACTGTACCTGCTTATTTCAATGACTCTCAACGTCAAGCAACCAAAGATGCAGGAACAATTGCGGGGCTTAATGTAATGCGAATAATTAATGAGCCCACTGCTGCAGCAATTGCATATGGTCTTGACAAGAAAGACATGTACCACCTAGAGAGAAATATTTTTGTCTTTGATCTGGGCGGTGGCACCTTTGATGTGTCTCTTGTCACAATTAAAAAGGGTCACTTCAACGTTAAAGTAGTTGATGGAGACACACACCTTGGTGGAGAGGACTTTGACAATAGAATGGTCAAATACTTTGTGGAAGAGTTCAAGAGAAAGCATAAGAAGGACATCACTGGGAGTCCAAAGGCCATTAGGAGGTTGAGAACTGCTTGTGAGAGAGCAAAACGAGCACTCTCATCCCCATCCATTGTTGATACAATCGTTGAGGTTGATGCTTTATACGAGTTGAAGATGAGTCAAGATTTGAATGATAATGCGCGTCATTCTGCATCTTGTACTACTAGTGACGATTCAAGCAATAAGAAAACAAAACGGACTGTGAAGGATGAGACGATAATCAAATGTAGTGTTGGCTTGATATCAATCAAGTGGGGTTATATTCGACTACGTACAAGTTGA 1065 0.4113 MGKRLQKLAIGIDLGTTYSCVAVWQHGRAEIIVNDQGNRTTPSYVAFTDTERMVGDAAKNMAAHNPTNTVFDAKRLIGRKFGDSHVLSDRNLWPFKIICGEGDKPKIVVNFKSQEKQFLAEEISSMILAKMREIAEAYLGSTVENAVVTVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKKDMYHLERNIFVFDLGGGTFDVSLVTIKKGHFNVKVVDGDTHLGGEDFDNRMVKYFVEEFKRKHKKDITGSPKAIRRLRTACERAKRALSSPSIVDTIVEVDALYELKMSQDLNDNARHSASCTTSDDSSNKKTKRTVKDETIIKCSVGLISIKWGYIRLRTS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0861 354 FunFam Heat shock protein 70 10 199 - -
Lele45g0861 354 PANTHER HEAT SHOCK PROTEIN 70KDA 9 332 IPR013126 GO:0005524|GO:0140662
Lele45g0861 354 Gene3D Actin; Chain A, domain 4 236 298 - -
Lele45g0861 354 PRINTS 70kDa heat shock protein signature 146 166 - -
Lele45g0861 354 PRINTS 70kDa heat shock protein signature 36 48 - -
Lele45g0861 354 PRINTS 70kDa heat shock protein signature 8 21 - -
Lele45g0861 354 PRINTS 70kDa heat shock protein signature 58 66 - -
Lele45g0861 354 PRINTS 70kDa heat shock protein signature 209 219 - -
Lele45g0861 354 Gene3D - 71 126 - -
Lele45g0861 354 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Lele45g0861 354 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Lele45g0861 354 FunFam heat shock 70 kDa protein-like 71 126 - -
Lele45g0861 354 Pfam Hsp70 protein 9 301 IPR013126 GO:0005524|GO:0140662
Lele45g0861 354 Gene3D - 192 235 - -
Lele45g0861 354 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lele45g0861 354 Gene3D - 10 191 - -
Lele45g0861 354 FunFam Heat shock cognate 71 kDa protein 235 314 - -
Lele45g0861 354 SUPERFAMILY Actin-like ATPase domain 199 292 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0861 Lele-ChrLele45 19229541 19232023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0861 1 297 Calmodulin-binding Proteins AT5G02500 74.074 1.11e-161 461