Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0844 ATGTCTTTCCAGCATAAAAGCTTTTGGATGCTGCGGGATGCAGGATGCCTAGCTGATGAAAATATGGGATATGAGAATTCTTCCAGAATTGAACCAAAGAGTGGTCATCAATGGTTTGTGGAAACAGGTGAACCAGAAATTATCAGCAACAATAAGAAGCAAGCTGTTGAAGCTGTTGGTGGCAGGCCAGTTTCAGGGGCATCACATTTGGATGTATCTCCTTGGGACCACAATTCTGGGTTTCACTCAGTTACAGGTCAATTTTCTGACCGTCTCTTTGGATCTGAGCCTGTAAGGACTTTCAATTTGGTTGATAAGAACATGCCATCAATGGGAAGTGGAAATCTGAATATGGGAAGGAAGGATTTTGAGAACAATTATGGAAATGATCCATCAGTGGGGCTGTCAATGTCTCATACTATCGAGGACCCTTCATCTTGTATCAATTTCGGTGGTATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATACTAACAATTGCATGTCTGCATCTATGGGGCACTCCTATAGTAGGGCAGATAATAATGCAATTTCGATGGTTGCTGACTACAATAAGAATGATAGGAATATATCATTAGGTCAGACTTACAACAGCGTAAATGAGAATATCATCTCTGGGGCTACTGCAATAACGAAGGCTGATGACAATCTTGGTTCAATGGGTCATGCATTCAATAAAGATGGAAGCTTTTTGATGATGGGCCACACTTATGGCAAGGGAGATGAAAGCGTCTTATCGATGGGTCAGCCCTTCGACAGGGGAGATGGAAATTTCATATCAATAGGTCAGTCATATGAAAAGGAAGATGGCAATTTGATATCACTGGGCAACTCATATAACAAGGGGCATGAAAATTTCATGCCAATGGGCCCAAGCTACAGTAAATCAGGAGAAAATTTCATTTCAATTGCTCCTTCCTATGACAAGGGAACTGATCATATCATGCCAGTGGGTCCTACATTTGACAAGGTGGATTCAAACATGGTATCAACAAACCCTTCATATGATAAAGGAGATTCCAACTCTTTGACGGTGGGTCACAACTACAATAAGAATGAGGGCTGTACCATATCTTTTGGAGGCTTTAATGATGATCCAGAGCCAAATCCCTCAGGTGGGATCATTAGTGGCTATGATTTGTTGATGGGCAACCAGAACTCAGCTCATGGTTTGGCTGGCCAGAAGGATCTAGTTGACTCAAACCCTGAATCGGTTGTAAATAGCAATCCAAAATCTAATTCTAAAACTGATAATGTCATTAAGAGTAAGGAACCGAAGGCAAGGAAGGTTCCTTCCAATAACTTCCCTTCAAATGTCAAAAGTCTGTTATCAACTGGAATTTTCGATGGTGTTCCCGTAAAGTATGTTTCTTGGTCACGGGAGAAACATCTTAAAGGAGTCATAAAAGGGACAGGGTATTTGTGCTCCTGTAATGAATGCAAGGAGTCCAAGGTTCTTAACGCGTACGAGTTTGAGCGTCATGCGGGTGCCAAGACCAAGCACCCAAACAATCACATTTACTTTGAGAATGGGAAAACCATCTATGCTGCTGTTCAAGAGCTGAAGAACACTTCTCAGGAGATGCTTTTTGATGCAATTCAAACTGTTACTGGATCTACCATCAACCAAAAGAATTTCCGAGTCTGGAAAGCTTCATACCAAGCTGCTACTCGGGAACTTCAACGCATATATGGAAAAGATGAAGTGGTCATCCCAACTTAA 1743 0.4142 MSFQHKSFWMLRDAGCLADENMGYENSSRIEPKSGHQWFVETGEPEIISNNKKQAVEAVGGRPVSGASHLDVSPWDHNSGFHSVTGQFSDRLFGSEPVRTFNLVDKNMPSMGSGNLNMGRKDFENNYGNDPSVGLSMSHTIEDPSSCINFGGIRKVKVNQVRDTNNCMSASMGHSYSRADNNAISMVADYNKNDRNISLGQTYNSVNENIISGATAITKADDNLGSMGHAFNKDGSFLMMGHTYGKGDESVLSMGQPFDRGDGNFISIGQSYEKEDGNLISLGNSYNKGHENFMPMGPSYSKSGENFISIAPSYDKGTDHIMPVGPTFDKVDSNMVSTNPSYDKGDSNSLTVGHNYNKNEGCTISFGGFNDDPEPNPSGGIISGYDLLMGNQNSAHGLAGQKDLVDSNPESVVNSNPKSNSKTDNVIKSKEPKARKVPSNNFPSNVKSLLSTGIFDGVPVKYVSWSREKHLKGVIKGTGYLCSCNECKESKVLNAYEFERHAGAKTKHPNNHIYFENGKTIYAAVQELKNTSQEMLFDAIQTVTGSTINQKNFRVWKASYQAATRELQRIYGKDEVVIPT 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0844 580 Pfam Tify domain binding domain 473 527 IPR032308 -
Lele45g0844 580 MobiDBLite consensus disorder prediction 398 440 - -
Lele45g0844 580 MobiDBLite consensus disorder prediction 407 423 - -
Lele45g0844 580 PANTHER AUTOIMMUNE REGULATOR 8 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0844 Lele-ChrLele45 19039504 19046349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0844 435 561 PHD Transcription Factor Family AT3G53680 54.331 1.00e-39 153