Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0834 ATGGGTTTAGCATGCTCAACTGGACCAGCTGAGACATTTTCTTCTTCAATTTTGTGCAAAGAATTTGAGATGGTACAAAGAATTGGGACTCGACTCTTTGTGAGCAGATTGTCATTCTTCACAACAGAAAGCCACCTCGTAAATCTGTTTTCTCCATTTGGAAGAATTACAGAAGCTAGGCTAGTGAAGGACCCAAAAACTCAAAGGCCTAAAGGTTTTGGCTTTGTCTCCTATGATTCAGAAATTGAAGCAGAGAAGGCTATGAACACCATGAATGGCAGGATAATTGATGGAAGGCTGATTTTTGTAGAGCCTGCAAAAGCTACAAGACCTAAAGAAGATGGTGCTTCCTAA 354 0.4068 MGLACSTGPAETFSSSILCKEFEMVQRIGTRLFVSRLSFFTTESHLVNLFSPFGRITEARLVKDPKTQRPKGFGFVSYDSEIEAEKAMNTMNGRIIDGRLIFVEPAKATRPKEDGAS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0834 117 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 32 101 IPR000504 GO:0003723
Lele45g0834 117 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 30 108 IPR000504 GO:0003723
Lele45g0834 117 SUPERFAMILY RNA-binding domain, RBD 29 111 IPR035979 GO:0003676
Lele45g0834 117 SMART rrm1_1 31 104 IPR000504 GO:0003723
Lele45g0834 117 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 31 108 - -
Lele45g0834 117 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 25 111 - -
Lele45g0834 117 Gene3D - 18 116 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0834 Lele-ChrLele45 18884814 18886716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0834 29 116 Eukaryotic Initiation Factors Gene Family AT2G23350 36.364 3.28e-11 57.0