Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0827 ATGGTGGGTAAAGACGATGCTAGAAAAATGTTCTGGCGGTCGGCCTCTTGGTCGGCGTCTCGCTCCGCCGCACACAATCCGGTTGGCGACGGAAAGGACTTCGTAGATCCGGATGGGAGTGTTGGTAATATCAACGGGGAAACTCGTAGGTATCCTCCCGCTCCGCTAACCCCTCGATCGCAGCAAAATTGCAAGGCACGATCTTTTTTGCCCCCGTTACAGCCGCTTTCAATTGCTCGGAGGAGCTTGGATGAGTGGCCGAAAGCGAGTTCTGATGATATCGGTGAGTGGCCTCATCCCCCAACTCCTAGTGGAAGAGGTAATGGAGAGAGGTTGAAGCTTGATTTATCTTCTACTCAGCGAAACCCTGATAAGAATGCTGGGCTTGTGAAAAGAGATAAGATTGCATACTTTGATAAAGAATGCTCAAAAGTGGCGGAACATATTTATCTTGGAGGAGACGCTGTTGCTAGGGATAGGGATATATTGAAGCAAAATGGGATTACTCATATTTTGAACTGTGTGGGGTTTGTTTGTCCTGAGTATTTCAAATCTGATTTTGTATATAGAACGTTGTGGTTGCAGGATAGTCCAACGGAAGATATTACTAGTATTCTGTATGATGTCTTTGACTACTTTGAAGATGTTAGGGAACAAAATGGAAGGGTGTTTGTGCATTGTTGCCAGGGGGTATCTCGGTCCACCTCGCTGGTGATTGCATACTTGATGTGGAGGGAAGGGCAGAGTTTTGATGATGCTTTTCAGTATGTGAAGGCAGCAAGAGGTATTGCTGATCCAAATATGGGTTTTGCTTGTCAATTACTGCAATGTCAAAAAAGGGTTCATGCATTCCCACTTAGCCCAAGCTCTTTGCTGAGAATGTATAGAATAGCCCCACACTCACCCTATGATCCATTGCATCTTGTCCCCAAAATGTTGACGAATCCTTCTCCATCTGCTCTGGATTCTAGAGGTGCATTTATCATACATATACCTTCTGCTATATATGTTTGGATTGGTACCAATTGTGAGGCCATCATGGAAAGGGATGCTAGAGGGGCTGCGTGTCAGATTGTTCGCTATGAGAAAGTGCAAGGTTCGATTTCGTTAATCAAGGAAGGTGAAGAACCGGATTACTTTTGGGATGCCTTTTCTAAGTTTTTGCCTTTGATGGAAAAACCTGATAATAGAATAGAAAATGGCAAATCAGCCAGAAATATTTCTCCTGGTGAGAGGAGAGCGGACTCATATAATGTTGATTTTGAAGTTTTCCAGAAAGCTATCATGGGAGGTTTTGTGCCTCCATTTGCTTCAGCAGAGGATGAACTTGAAACCCACCTTCCTGCTAGGGAGAGCTGTTGGAGTGTGTTAAGACGTAAGTTTGCCTCTGCCAACATGAAGGCATTTGTCTCAGAGCCTAAATTATCATATTCAAGGGTTTATTTGGATTCAGTGTCAAGTACTCATTCATCGGTAAAGTCATCTCCATTATCATCACTGTCATCAACTACATCTTCTTCATCCCCTTATCTCTCACCAGATTCCATTACTTCTGATTCAAGCAATAGTTCAAAGTGTTCAGAAACATCTCTTGATTCTCCTTATGCAGCTTTGACTTCTACGCCAGCGTCCTCTTCTTTATCTAACTTTTCTAACTTGTCCCTCCTTTCATCTAGTTGTTCTTCTCAACCAGTAACAAAAGGTGCGGAAACTTGTAGTGTCAAGTTGGCATCACAGCCCTGTCATCAGTCAGCCTCCCTGATTTTGAAAAAACCTTCAACTTCTCTTGCTGAGCGCAGGGGCAGTCTGTCAAAGTCTTTGAAGTTACCACTGATGAATGATAAAACACTGGTGATGAATAGATCATCAACTTTTAATGCTACTCGAGAAGATGGTGCTGTCATGAATGGCATCACTAGCCATTTGCATCAATCAGATAGTTTAGAAAATTCAGCTGACGTAAACAACCATGTCAAGGGTAGAGGTTTGGATTCAACTCAATTGTGCGAGGTATTATTATGTCCAGGTGCTGCAGATAGTGTTGACTACAGCAAAGCTTCATTTGTTGGAAACTGTAGTCACTCTTGGGTGAGAAGCTCTTCAAGGGAAGACATAAAGTCTACTTCATCAAATGGAATGGATGGAAGTGGTCTCCTACAATCTAATAATAAACAAAATTTAGTTTATCACTGGCCCAGCTTAGAGAAGATTGTGACATTTGGTGCAAGTCATTTGGATTCTAAAGCTGCTTTTGTTACTTTCTCTTCAAGTACAATTTCTGGTAAACATGCAAGAAACATTTTATATTTTTGGCTGGGAAGTTCTTTCAGCTGCGCTGCATCTCCGGTTCGGCTAGATCATAACAGAGAGATAGATTGTCGAGGAGGAGTTGACTGGAATCAAGTTGGTTGTGATATCCTTGCTCATTTTGGTTTGCCAAATGACACTATCATCAAGATTGTTAAACAGAATGAAGAACCAGAAGAGTTTCTTGCCTTACTGAGAACATTGTAG 2514 0.424 MVGKDDARKMFWRSASWSASRSAAHNPVGDGKDFVDPDGSVGNINGETRRYPPAPLTPRSQQNCKARSFLPPLQPLSIARRSLDEWPKASSDDIGEWPHPPTPSGRGNGERLKLDLSSTQRNPDKNAGLVKRDKIAYFDKECSKVAEHIYLGGDAVARDRDILKQNGITHILNCVGFVCPEYFKSDFVYRTLWLQDSPTEDITSILYDVFDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTNPSPSALDSRGAFIIHIPSAIYVWIGTNCEAIMERDARGAACQIVRYEKVQGSISLIKEGEEPDYFWDAFSKFLPLMEKPDNRIENGKSARNISPGERRADSYNVDFEVFQKAIMGGFVPPFASAEDELETHLPARESCWSVLRRKFASANMKAFVSEPKLSYSRVYLDSVSSTHSSVKSSPLSSLSSTTSSSSPYLSPDSITSDSSNSSKCSETSLDSPYAALTSTPASSSLSNFSNLSLLSSSCSSQPVTKGAETCSVKLASQPCHQSASLILKKPSTSLAERRGSLSKSLKLPLMNDKTLVMNRSSTFNATREDGAVMNGITSHLHQSDSLENSADVNNHVKGRGLDSTQLCEVLLCPGAADSVDYSKASFVGNCSHSWVRSSSREDIKSTSSNGMDGSGLLQSNNKQNLVYHWPSLEKIVTFGASHLDSKAAFVTFSSSTISGKHARNILYFWLGSSFSCAASPVRLDHNREIDCRGGVDWNQVGCDILAHFGLPNDTIIKIVKQNEEPEEFLALLRTL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0827 837 Pfam Dual specificity phosphatase, catalytic domain 149 279 IPR000340 GO:0008138|GO:0016311
Lele45g0827 837 MobiDBLite consensus disorder prediction 14 71 - -
Lele45g0827 837 Gene3D Severin 292 388 IPR029006 -
Lele45g0827 837 Gene3D Protein tyrosine phosphatase superfamily 118 283 IPR029021 -
Lele45g0827 837 ProSitePatterns Tyrosine specific protein phosphatases active site. 225 235 IPR016130 GO:0016311|GO:0016791
Lele45g0827 837 SMART dsp_5 141 280 IPR020422 GO:0006470|GO:0008138
Lele45g0827 837 MobiDBLite consensus disorder prediction 489 525 - -
Lele45g0827 837 MobiDBLite consensus disorder prediction 89 126 - -
Lele45g0827 837 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 200 261 IPR000387 GO:0016311|GO:0016791
Lele45g0827 837 SUPERFAMILY Actin depolymerizing proteins 288 394 - -
Lele45g0827 837 ProSiteProfiles Dual specificity protein phosphatase domain profile. 141 283 IPR020422 GO:0006470|GO:0008138
Lele45g0827 837 PANTHER MKPA PROTEIN 7 834 - -
Lele45g0827 837 CDD DSP 142 276 - -
Lele45g0827 837 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 133 282 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0827 Lele-ChrLele45 18631224 18636343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0827 1 177 Protein tyrosine phosphatase (PTP) family AT3G55270 66.489 3.89e-73 253