Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0816 ATGGCGAGAATCAAGGTTCATGAACTGAGGCAGAAGACGAAGGGCGATCTGCTCAACCAGCTCAAGGAGCTTAAGGCTGAGCTTGCTTTGCTAAGAGTTGCAAAAGTCACTGGCGGTGCACCGAACAAACTTTCCAAGATTAAGGTGGTGAGGTTGTCCATAGCTCAGGTGTTGACGGTTATATCTCAGAAGCAGAAGGCTGCGTTGAGGGAGGTATATAAGAATAAGAAGTATTTGCCTCTTGATCTGCGTCCTAAGAAGACTAGGGCTATCCGTAGAAGGCTTACTAAGCACCAGGCCTCATTGAAGACCGAAAGACAAAAGAAAAAGGATACATACTTTCCTGTGAGGAAATATGCCATTAAGGTGTAG 372 0.457 MARIKVHELRQKTKGDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKDTYFPVRKYAIKV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0816 123 Coils Coil 14 34 - -
Lele45g0816 123 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lele45g0816 123 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Lele45g0816 123 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Lele45g0816 123 TIGRFAM L29: ribosomal protein uL29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lele45g0816 123 FunFam 60S ribosomal protein L35 78 123 - -
Lele45g0816 123 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lele45g0816 123 PANTHER 60S RIBOSOMAL PROTEIN L35 1 123 IPR045059 GO:0000463|GO:0022625
Lele45g0816 123 CDD Ribosomal_L29_HIP 8 64 - -
Lele45g0816 123 Gene3D - 78 123 - -
Lele45g0816 123 FunFam 60S ribosomal protein L35 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0816 Lele-ChrLele45 18463357 18464809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0816 1 123 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 89.431 3.33e-74 214