Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0800 ATGATCGCAGATACGGACCCTCCTCCTCCTGCTCCTTCCACTGTATCGGCCTCCACAGATTCTGCCTCACCTTCCTCCTCTTCCAACGCCACGGATTCTTCATCCCATTCTGCCTCCGCTCCGCCTCCTGCCGATGCTGATCAGGCAGCGCAGCCACCGGTGCCAAAACCTGTGATTTCCTCCAAGGATTCCAATTCGCTCTTCAGCGGTGGCGGCGTCAGCTGTTTCTCGGGAAGTCGAAATGGAAGATTCAACTATGGATATTCCAGTTTCAAGGGTAAAAGGACTTCAATGGAGGATTTCTATGAGACAAGGATATCAGAGGTTGATGGTCAGATGGTTGCCTTTTTTGCTGTTTTTGATGGTCATGGAGGTTCTCAGACCGCTGAATACCTGAAAAAGAATCTCTTTAAGAATATAAGTAGCCATCCTGACTTTGTCAAAGACACAAAGACTGCTATTGTGGAAGCATTTAAACAGACAGATGTCGATTACCTGAAAGAGGAAAAGGGTTATCATAGAGATGCTGGGTCCACTGCTTCAACAGCAGTATTGGTGGGGGATCGAATTGTTGTTGCCAATGTTGGTGATTCTAGAGTAGTTGCTTCTAGAGCTGGTTCAGCTGTCCCTTTGTCAATTGATCACAAACCTGATAGATCCGATGAACGTCTTAGAATTGAACAGGCTGGGGGATTCGTTATTTGGGCAGGCACATGGCGGGTTGGTGGTGTTCTAGCTGTTTCGCGTGCATTTGGTGACAAACTTCTTAAGCCTTACGTTGTTGCTGATCCAGAAATTCAGGAAGAAGAGATTGATGGTGTAGATTTTATAATAATAGCTAGTGACGGACTTTGGAATGTCATATCAAACAAGGAAGCTGTGTCTTTAGTGCAAAACATAACAGACGCAGAAGCAGCATCCAAAGAACTTATTAAAGAAGCCTACACAAGAGGAAGCTCAGACAACATTACTTGTGTGGTTGTTCGATTTGATGTATCTTGA 1002 0.4531 MIADTDPPPPAPSTVSASTDSASPSSSSNATDSSSHSASAPPPADADQAAQPPVPKPVISSKDSNSLFSGGGVSCFSGSRNGRFNYGYSSFKGKRTSMEDFYETRISEVDGQMVAFFAVFDGHGGSQTAEYLKKNLFKNISSHPDFVKDTKTAIVEAFKQTDVDYLKEEKGYHRDAGSTASTAVLVGDRIVVANVGDSRVVASRAGSAVPLSIDHKPDRSDERLRIEQAGGFVIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEAASKELIKEAYTRGSSDNITCVVVRFDVS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0800 333 ProSitePatterns PPM-type phosphatase domain signature. 116 124 IPR000222 GO:0043169
Lele45g0800 333 ProSiteProfiles PPM-type phosphatase domain profile. 85 330 IPR001932 -
Lele45g0800 333 MobiDBLite consensus disorder prediction 1 65 - -
Lele45g0800 333 FunFam probable protein phosphatase 2C 59 77 333 - -
Lele45g0800 333 PANTHER PROTEIN PHOSPHATASE 39 330 - -
Lele45g0800 333 Pfam Protein phosphatase 2C 86 323 IPR001932 -
Lele45g0800 333 MobiDBLite consensus disorder prediction 15 41 - -
Lele45g0800 333 SMART PP2C_4 75 328 IPR001932 -
Lele45g0800 333 SUPERFAMILY PP2C-like 77 331 IPR036457 -
Lele45g0800 333 CDD PP2Cc 84 330 IPR001932 -
Lele45g0800 333 Gene3D - 77 332 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0800 Lele-ChrLele45 17985232 18005150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0800 58 333 PP2C-type Phosphatase Gene Family AT1G43900 71.377 2.69e-151 428