Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0795 ATGCTGTTGCGGCCTCGCACTCCAACCTTTTGGTGGTCTCTGCGTTCTCTTTCCAGCAACGCCCATCGGTTTCCTCACCCGTCCTCCTCCTTCCACCTTAACCTTTCTTCTTCAATCCAACCTCAGGTTTCTGACACATTGGACTGTGATTGCGATGGTTTCTTGCCTTGGTTGGAGCGGAAAGCTGGCTCTAGGATTTCGTCAGCACTTTCAATTGGGGAATCTTCATATGGCAGGGCTCTGTTTGCCTCTAGGATTATACACACTGGTGAATGCTTTTTACAGGTTCCTTATGCTATGCAAATAACTGTGGATAATTTACTCCCAGAAATCAGATCTTTGATCAGCAATGAAGTTGGAAATGTTTCAAAACTTGCTGTTGTTATTCTAGTTGAGCAGAAACTGGGTCAGGACTCTGAGTGGGACCCATATATCAGCTGTCTTCCTCAGCAAGGACAGCTGCATAATACAATATTTTGGACCGAAAGTGAATTGGACATGATTCGGATAAGCTCAGTGTATCAGGAAACTATCAATCAAAAGTCTCAAATTGAGAAGGACTTTTTGGCAATCAGACCAGTTTTCGAAAGCCTCCTTAAAAGTTTTGGTGAATTCACTTTCACGGATTTCATGCACGCATGCACACTTGTTGGTTCTCGAGCTTGGGGAAGCATGAAGGGCTTATCACTGATTCCATTTGCAGATTTCTTGAATCATGATGGAGTTTCAGAAGCAATCGTAATGAGCGATGATGACAAACAATACTCCGAAGTTATTGCTGATCGTGACTATGCTCTTGGTGAACAGGTATTAATAAGATATGGAAAATTTTCTAATGCTACCTTGATGCTGGACTTTGGCTTTACACTTCCATACAACAATTATGATGAGGTCCAGATCCAGCTTAATATACCAAAGCATGATCCTCTGCATGACTTGAAGATGAAACTCTTGAGGCAATATTTTGTGCGCCCTACCAAAGACGTGAAAGGATTGAGTAACTCTGTCAATTCTTTCATAATCAAGGAAGTGACATCTGCCAGAGGAAAAGGAAAGGGACTTCCACAATCTCTTCGGGCATTTGCTCGCGTCCTTTCTTGCACCTGTCCTCAAGAACTTAACGATTTGGCCGTGGAGGCCGCACAAACTGATGGTAGGCTCGCTAGGCGGCCATTGCGCAGTATCAACAAAGAGATTGAAGCACACATGATGTTGTCTTCATTATTCACCAAATTAATTGCTGAGCACTCTGAAGCCATTCTGTCATTGGAATTCTCCAATGTTTCTTCCCTTTCTACAAAACTTGCTGTGAGAAGAACAATGGCTCGGGATCTCCTAGTTGGTGAGCTTCGCATTCTCAAATCTGCTTCTGCTTGGCTTGACAATTACTGTTCTTTGACTGGATAA 1407 0.4314 MLLRPRTPTFWWSLRSLSSNAHRFPHPSSSFHLNLSSSIQPQVSDTLDCDCDGFLPWLERKAGSRISSALSIGESSYGRALFASRIIHTGECFLQVPYAMQITVDNLLPEIRSLISNEVGNVSKLAVVILVEQKLGQDSEWDPYISCLPQQGQLHNTIFWTESELDMIRISSVYQETINQKSQIEKDFLAIRPVFESLLKSFGEFTFTDFMHACTLVGSRAWGSMKGLSLIPFADFLNHDGVSEAIVMSDDDKQYSEVIADRDYALGEQVLIRYGKFSNATLMLDFGFTLPYNNYDEVQIQLNIPKHDPLHDLKMKLLRQYFVRPTKDVKGLSNSVNSFIIKEVTSARGKGKGLPQSLRAFARVLSCTCPQELNDLAVEAAQTDGRLARRPLRSINKEIEAHMMLSSLFTKLIAEHSEAILSLEFSNVSSLSTKLAVRRTMARDLLVGELRILKSASAWLDNYCSLTG 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0795 468 SUPERFAMILY SET domain 52 294 IPR046341 -
Lele45g0795 468 Pfam Rubisco LSMT substrate-binding 306 453 IPR015353 -
Lele45g0795 468 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 50 422 - -
Lele45g0795 468 Pfam SET domain 78 275 IPR001214 GO:0005515
Lele45g0795 468 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 47 288 - -
Lele45g0795 468 FunFam Predicted protein 291 466 - -
Lele45g0795 468 Gene3D - 291 463 IPR036464 -
Lele45g0795 468 Gene3D set domain protein methyltransferase, domain 1 48 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0795 Lele-ChrLele45 17862710 17880634 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele45g0795 SET 3.8e-09 No_clan