Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0776 ATGCAAAACTTTGCATCCACCAGCTTCAGTCAAGATCATAGCCCCATCAATACAGATCTTTGCTTTCACACTACCAACCAATCCTTCTTCTCTGGGTCTCTTCCTGCTTATTACCAGACGCCATCAAGTACTACTGTGGGTTCATCAAAATCACCTAAGTCATCAAATTTAAGCAATAGGAAGCCATCTATAAATATCACCATCCCTCCGATGGGCTTAAGGATGAGCTCCTCATCATCATCATCATCATCGGATGTTACAGAGGACAAGCACTACCGAGGGGTTCGACGGCGGCCATGGGGGAAGTTCGCGGCGGAGATTCGTGACCCGAATCGAAAGGGATCGAGGGTGTGGCTTGGAACCTTCGATACAGCCATGGAAGCAGCAAAAGCATATGATAGAGCTGCGTTTAAGATGAGAGGAAGCAAAGCTATACTGAATTTCCCTCATGAGATTGGAGCAACAATAAGTTCTGAAGAATCAAAGCCATCAACAGTGGTTGGTGAGAAAAGGGGAAGAGAGGAAGAAGAGAGTGATGAACAGGACAATAACGAAGAATTTAAGAAGCTGAAGAAGGAGAAGGAAGAGGCACTCTCACCCACAGGGGGGGTTGTTTCTTCTTCTTTTTCTTCTTCTGCAACAGTTGGTCCTTTAACGCCGTCATGTTGGAAGGGGTTTTGGGATACTGAAGTTGCCAACACTATTTTCAGTGTTCCTCCGTTATCGCCGTTATCTCCTCCAATGATGATTGTGACGTAG 759 0.4572 MQNFASTSFSQDHSPINTDLCFHTTNQSFFSGSLPAYYQTPSSTTVGSSKSPKSSNLSNRKPSINITIPPMGLRMSSSSSSSSSDVTEDKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAMEAAKAYDRAAFKMRGSKAILNFPHEIGATISSEESKPSTVVGEKRGREEEESDEQDNNEEFKKLKKEKEEALSPTGGVVSSSFSSSATVGPLTPSCWKGFWDTEVANTIFSVPPLSPLSPPMMIVT 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0776 252 MobiDBLite consensus disorder prediction 41 85 - -
Lele45g0776 252 SUPERFAMILY DNA-binding domain 91 151 IPR016177 GO:0003677
Lele45g0776 252 ProSiteProfiles AP2/ERF domain profile. 91 149 IPR001471 GO:0003700|GO:0006355
Lele45g0776 252 MobiDBLite consensus disorder prediction 201 215 - -
Lele45g0776 252 Pfam AP2 domain 91 141 IPR001471 GO:0003700|GO:0006355
Lele45g0776 252 Gene3D AP2/ERF domain 90 151 IPR036955 GO:0003700|GO:0006355
Lele45g0776 252 Coils Coil 173 193 - -
Lele45g0776 252 MobiDBLite consensus disorder prediction 156 215 - -
Lele45g0776 252 FunFam Ethylene-responsive transcription factor 2 90 150 - -
Lele45g0776 252 MobiDBLite consensus disorder prediction 164 198 - -
Lele45g0776 252 PRINTS Ethylene responsive element binding protein signature 131 151 IPR001471 GO:0003700|GO:0006355
Lele45g0776 252 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Lele45g0776 252 MobiDBLite consensus disorder prediction 41 93 - -
Lele45g0776 252 PANTHER DNA-BINDING DOMAIN 56 195 IPR044808 GO:0003700|GO:0009873
Lele45g0776 252 CDD AP2 90 150 IPR001471 GO:0003700|GO:0006355
Lele45g0776 252 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0776 Lele-ChrLele45 16295844 16296602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0776 2 252 AP2-EREBP Transcription Factor Family AT5G61600 40.157 2.08e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele45g0776 AP2 8.5e-16 CL0081