Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0762 ATGGCCGTAAATGAAGACAACGAACGAGAATATGTACCCCAGAAAGAGAAGCAATCTTCAGAGGAAGAGAAGAGGAAGAAGAAAATTGTACCTGGGAGTTTGATGAAAGCTCTAATGAGGCCTGGAGGAGGTGAATTGACACCTTCAGATGGTGATCAGATCATATATCATTGTACAATTCGTACTTTAGATGGAGTAGTTGTGCGATCTACCCGATCAGAATTTGGAGGGAAGGGTGTCCCGACAAGACATGTATTGGGCAAAAGCAAGATGCTATTGGGTTTGTTAGAAGGAATTCCAACAATGTTGAAGGGTGAAGTAGCAATGTTCAAGATGAAGCCTCAGTTGCATTATGGTGAGGATGATTGTCCCATTTCTACTCCTGATGGGTTTCCAAAGGAAGATGAACTTCATTTTGAAATTGAGATGATAGAGTTTTTCAAAGCCAAGGTTGTTACTGACGACTTGGGAGTTATAAAAAAGGTAATATGTGAAGGGCAGGGTTGGGAATCTCCACGAGAACCTTATGAAGTGAAAGCTTGGATATCAGCAAAGACAGTTGCAGGGAAGTTGATTGTGTCCCACACAGAAGGAGAACCTTATTTCTTTACATTTGGAAAACCAGAGGTACCTAAAGGTCTTGAAATGGGGATAGGAACAATGACACGTGGAGAGAAGGCTGTAATATTTGTTCGCAGTCAGTATCTAACTCAGTCTCCTTTGATGCCGCTGAATGAAGATTATGAAGAAGTCCAGTTTGAAGTGGAGCTTGTCCACTTTATTCAAGTTAGAGATATGCTTGGAGATGGGCGCCTAATAAAACGTCGGATTCGTGATGGGAAAGGTGATTTTCCAATGGATTGCCCTCTTCATGACAGTCTACTTCGTGTTCATTACAAGGGTATGGTTCTTGATGAAGAAAAGAGGGTATTCTATGACACGAGAGTTGATAATGATGGTCAACCAGTGGAGTTCTGTTCTGGAGAAGGGCTTGTGCCAGAGGGGTTTGAAATGTGTGTTCGTTTGATGCTGCCTGGAGAGGTAGCTCTCGTCACTTGCCCGCCAGACTTTGCTTATGATAAGTTTCTGAGGCCAGAAAATGTTCCTGAGGGTGCCAATATTCAATGGGAAATTGAGCTTCTTGGTTTTGAAATGCCAAAGGACTGGACTGGATTTGACTTCCAAAGTATAATGGATGATGCTGAGAAGATTAGAAACACGGGTAACAGGCTGTTCAAAGAAGGAAAATATGAACTTGCCAAGGCAAAGTATGAAAAGTTACTTCGAGAATTTAATCACGTCAATCCACAAGATGATGAGGAAGGAAAAGTATTTTCAGATACACGTAACTTGTTACATCTGAATGTGGCTGCAAGCTATCTGAAATTGGGAGAATTTAGAAAGTCCATTGAGTTTTGCAATAAGGTTTTGGATGCAAACCCTGCACATGTCAAGGGTCTTTACCGTCGTGGAATGGCCTGCCTGGCAGCTGGAGATTTTGAAGAAGCAAAAAGTGATTTCAACATGATGATGAAAGTTGACAAGTCAACTGAACCAGACGCAACCTCAGCTCTTCTTAAACTGAAGCAGAAGGAGCAGGAAGCTGAGAAGAAGGCTCGAAAGCAATTTAAAGGCCTTTTCGACAAGAAACCTGGAGAAATTGCAGAAGTCACGGGTGAAGAGGATAAAGATCGGAAGAAAAGCGAAAGCAAGGAGGAGGATGAAGAACATGGAGGTTCTGATTCAGAGGATTCACGTGAAGTTGCACCTGATGGCCGTCAAATGTGGTGCTTCTCTCGCTTTTGGCCAAGCAGATTAGTGTCATCCTTTTGGCTTCGAAGATGTACTATTCTATGA 1857 0.4243 MAVNEDNEREYVPQKEKQSSEEEKRKKKIVPGSLMKALMRPGGGELTPSDGDQIIYHCTIRTLDGVVVRSTRSEFGGKGVPTRHVLGKSKMLLGLLEGIPTMLKGEVAMFKMKPQLHYGEDDCPISTPDGFPKEDELHFEIEMIEFFKAKVVTDDLGVIKKVICEGQGWESPREPYEVKAWISAKTVAGKLIVSHTEGEPYFFTFGKPEVPKGLEMGIGTMTRGEKAVIFVRSQYLTQSPLMPLNEDYEEVQFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGMVLDEEKRVFYDTRVDNDGQPVEFCSGEGLVPEGFEMCVRLMLPGEVALVTCPPDFAYDKFLRPENVPEGANIQWEIELLGFEMPKDWTGFDFQSIMDDAEKIRNTGNRLFKEGKYELAKAKYEKLLREFNHVNPQDDEEGKVFSDTRNLLHLNVAASYLKLGEFRKSIEFCNKVLDANPAHVKGLYRRGMACLAAGDFEEAKSDFNMMMKVDKSTEPDATSALLKLKQKEQEAEKKARKQFKGLFDKKPGEIAEVTGEEDKDRKKSESKEEDEEHGGSDSEDSREVAPDGRQMWCFSRFWPSRLVSSFWLRRCTIL 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0762 618 Gene3D Tetratricopeptide repeat domain 389 544 IPR011990 GO:0005515
Lele45g0762 618 FunFam Peptidylprolyl isomerase 389 545 - -
Lele45g0762 618 MobiDBLite consensus disorder prediction 1 28 - -
Lele45g0762 618 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 144 IPR001179 GO:0003755
Lele45g0762 618 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 293 381 IPR001179 GO:0003755
Lele45g0762 618 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 176 257 IPR001179 GO:0003755
Lele45g0762 618 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 51 147 IPR001179 GO:0003755
Lele45g0762 618 SUPERFAMILY FKBP-like 6 150 - -
Lele45g0762 618 MobiDBLite consensus disorder prediction 552 589 - -
Lele45g0762 618 FunFam Peptidylprolyl isomerase 262 386 - -
Lele45g0762 618 Gene3D - 149 261 IPR046357 GO:0003755
Lele45g0762 618 FunFam Peptidylprolyl isomerase 151 261 - -
Lele45g0762 618 Pfam Tetratricopeptide repeat 455 483 IPR019734 GO:0005515
Lele45g0762 618 SUPERFAMILY FKBP-like 251 383 - -
Lele45g0762 618 SUPERFAMILY TPR-like 398 539 IPR011990 GO:0005515
Lele45g0762 618 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 194 261 IPR001179 GO:0003755
Lele45g0762 618 SMART tpr_5 484 517 IPR019734 GO:0005515
Lele45g0762 618 SMART tpr_5 450 483 IPR019734 GO:0005515
Lele45g0762 618 SMART tpr_5 401 434 IPR019734 GO:0005515
Lele45g0762 618 FunFam Peptidylprolyl isomerase 8 150 - -
Lele45g0762 618 SUPERFAMILY FKBP-like 150 260 - -
Lele45g0762 618 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 150 262 - -
Lele45g0762 618 ProSiteProfiles TPR repeat profile. 450 483 IPR019734 GO:0005515
Lele45g0762 618 Gene3D - 262 383 IPR046357 GO:0003755
Lele45g0762 618 Gene3D - 2 148 IPR046357 GO:0003755
Lele45g0762 618 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 384 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0762 Lele-ChrLele45 11140841 11168876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0762 47 549 Calmodulin-binding Proteins AT5G48570 30.814 4.52e-62 214