Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0761 ATGGCCTCGTCGACACCAGGTAGCTCTCGATCAACTGCTCTCAGGGATGACGACTCCGACGCTGCTAAACTCGAGGTTACCGGTAGCTGGGATGCCATCGAATGGACCAAAATTGAGCCCATCATTCGCCCCGTTTCGCGGGAGAATTTAGATTTCTTGCTTGAAGCTGAGCAAGTCAAAGCCCAAGAATATGGTGTTGTTCTTGTTAATAACAACAATGTGGGTACATTAATGGTTACAAATTTTCGCTTCCTATTTGTGAGTGAGAAAACCACAAAAGTTATTGGCCTTGGAACAATTCCACTTGCTACAATTGAGAAGTTTACCAAGATAGCTGTGAAGACTCCTTCAGCTCTTCGTCAGTTGGACAAAACACCATCACAAAGATTGCTCCAAGTCATTGGAAAGGATATGAGAATTATTGTTTTTGGTTTCAGACCTCGTACAAAACAGAGACGTGCAATATTTGAAGCATTACTGAGATTGACAAAACCTGCAAGACTTTGGGATCTCTATGCTTTTGTATCAGGGCCTTCTAGATTAAGCAACACCAACCCAAAAGTTCGCTTGCTGGATGAGTATTTTCGACTTCTTGGGAAAGGATCTTATTGTGGATCAATCAATATGATCAGAAGTGGGTCATTTACCTTGTCGAATGCCTCTTGGAGAATAAGTAGTGTGAATTCCAACTATACTATGTGTCAGACTTATCCATTTGCATTGATTATTCCAAAGAGCATTAGTGATGATGAAGTGCTCCAGGCTTCCACTTTTCGGGCAAGATGTCGACTGCCTGTAGTTTCATGGTGTGATCTTGGTTCTGGTGCAGTCCTTGCTCGTTCATCCCAACCCTTAGTTGGTCTCATGATGAATATGAGGAGTAATGCAGATGAAAAGCTTGTGGCTGCACTTTGCAACAAACTGGATGATGGTTCACGGAGGAAGCTATATATTTCTGACGCAAGACCAAGGAAAAATGCTTTAGCTAATGGGGCCATGGGAGGTGGTTCAGAGTCATCTTCAAATTACTTCCAATCTGAGATAGTCTTTTTTGGGATAGACAACATCCATGCAATGAGAGATAGCTTTGGTAGACTCAGAGAGTACTTAGATACGTATGGAAGAGCATCATCAGATGGGATGTCATCTTTTTTGAGGAATGGTGGGTGGACATGGGGTGGAGGATTACTAAGTAGTATGTCTGCTTCAGTATCAACACTTGGGGATAGTGGATGGTTACTGCACATTCAGAATGCCTTGGCTGGTTCAGCTTGGATTGCTGCTCGTGTTGCTATTGAAAAGGCTTCTGTGCTTGTACATTGCAGCGATGGATGGGATAGAACAACTCAATTGGTTTCACTTGCTAGTTTGTTGCTTGATCCATACTATCGGACATTCAAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGTTAGCATTTGGTCATCCATTCTCAGATCGGGTTGGAATGCCATCAGTCACTGGAAGTGGCAACACTCCTTCTGAGTTGTCTTGGCAATCTTCTGGAAATCACCCATCATCACCCATGCGTCAATCATCAGGAGCATTCAGCTCCCAACCTCCTGCCTCTTATGCACAAACATCAAACAACTACTCTCCAATTTTTCTGCAGTGGGTTGACTGTGTTTCTCAATTGCTGCGGACATATCCGTTTGCTTTTGAGTTCTCCTCAGCTTTCCTGGTGGACTTCTTAGACTGTGTGCTTTCTTGCCGCTTTGGAAACTTCTTATGTAACAGTGAGAAGGAAAGGCAGCAATTCAATGTTTTTGAAGCTTGTGGATGTTTGTGGGCATACCTAGCTGAGTTGCGTGCTTCAGAGAGTGGTTCTCATGTGCATTATAACCTCTTTTATGAACCGTCAAAGCATAATGGTCCTCTTCTGCCTCCAGCAGCAGCTCTGGCCCCAACTTTGTGGCCCCAATTCCATCTCCGTTGGGTTTGTACTGAAGAATCACAGGCTGGGGAGATTGAAGTAGAATGTAGGAGGATGGCTTTAAATTTCTCAGAGATGAGGAAGGCTAAAGAAGTGGCAGAGAGGAAAGCCAAAGAAATTGCAAATGCAATGGAATCACTGAAAGTAGATCATAGAAACGAGAAGCAACTAAGAATATCAGCGATGAATATAGCCAAAAGGAAAAACAAAGAAAATGTGGTGATGAAGAGGGCAATTCAGTCAATTGGACGCAAGGTTTCCTTCTCTCGCAGCGATGACAGTATTGTTGATATTGAAATCTGCCCAGCTGAAGTAGCACGAAACTTGAAGTATTCTCTAACAGGAAAGGAATTTGATGATAAAAAGGATTTATCCGCTTCAGTAACAATTACAGAAGACTGCAATGATGCAAACAATGCTATTAGTCAAGTATGTGAAACTCTATGCCCATTTCGTACTCAAGATGGACACTGCAGGTGGCCCGATTCTGCTTGTGCTCAACGTGGCAGCCAATTTGTTGGTCTAAAGGCAAACTTTGATGCTCTTGATCAACTCTTAATTGATGATGATTATTTCAAGCCTGAGTGA 2541 0.4294 MASSTPGSSRSTALRDDDSDAAKLEVTGSWDAIEWTKIEPIIRPVSRENLDFLLEAEQVKAQEYGVVLVNNNNVGTLMVTNFRFLFVSEKTTKVIGLGTIPLATIEKFTKIAVKTPSALRQLDKTPSQRLLQVIGKDMRIIVFGFRPRTKQRRAIFEALLRLTKPARLWDLYAFVSGPSRLSNTNPKVRLLDEYFRLLGKGSYCGSINMIRSGSFTLSNASWRISSVNSNYTMCQTYPFALIIPKSISDDEVLQASTFRARCRLPVVSWCDLGSGAVLARSSQPLVGLMMNMRSNADEKLVAALCNKLDDGSRRKLYISDARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRDSFGRLREYLDTYGRASSDGMSSFLRNGGWTWGGGLLSSMSASVSTLGDSGWLLHIQNALAGSAWIAARVAIEKASVLVHCSDGWDRTTQLVSLASLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRVGMPSVTGSGNTPSELSWQSSGNHPSSPMRQSSGAFSSQPPASYAQTSNNYSPIFLQWVDCVSQLLRTYPFAFEFSSAFLVDFLDCVLSCRFGNFLCNSEKERQQFNVFEACGCLWAYLAELRASESGSHVHYNLFYEPSKHNGPLLPPAAALAPTLWPQFHLRWVCTEESQAGEIEVECRRMALNFSEMRKAKEVAERKAKEIANAMESLKVDHRNEKQLRISAMNIAKRKNKENVVMKRAIQSIGRKVSFSRSDDSIVDIEICPAEVARNLKYSLTGKEFDDKKDLSASVTITEDCNDANNAISQVCETLCPFRTQDGHCRWPDSACAQRGSQFVGLKANFDALDQLLIDDDYFKPE 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0761 846 Gene3D - 59 163 IPR011993 -
Lele45g0761 846 ProSiteProfiles Myotubularin phosphatase domain. 199 649 IPR010569 -
Lele45g0761 846 PANTHER MYOTUBULARIN-RELATED 44 755 IPR030564 -
Lele45g0761 846 Pfam Myotubularin-like phosphatase domain 192 591 IPR010569 -
Lele45g0761 846 Coils Coil 677 701 - -
Lele45g0761 846 MobiDBLite consensus disorder prediction 494 528 - -
Lele45g0761 846 SUPERFAMILY PH domain-like 53 175 - -
Lele45g0761 846 CDD PTP-MTM-like 262 551 - -
Lele45g0761 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 439 449 IPR016130 GO:0016311|GO:0016791
Lele45g0761 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 217 653 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0761 Lele-ChrLele45 10774286 10823865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0761 1 846 Protein tyrosine phosphatase (PTP) family AT3G10550 64.512 0.0 1098