Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0750 ATGGATCAAGAGCCTCAAGCCAAAAAGATAGTTGTGGGGATAGATGAAGGCGAAGAATATCCAAAGAACATAAGCGAGGACTTTGGAAGAAAGAAAGATGAGGGTCGATCGGCGGCGATCGACAGTGAACAGCGGCGATGATGGTTGACGATGGCATTGTGGTCGCTAGTTTGTTTAGAAGTGCAAATTAGATTCATGGGTATTTGCTTCAGCATTGACTCTGATACAAAGGCCCCAGGATATGAATCCGTCACACCAACTAAGCAAGATAGAAGCAGAAGCTACACTTCATCTCCTATGAATATCAAAGATCTTCGCCAAAGTCCTGGCTATAGGAATGTTGATATATTTTCCTATGATGAACTGAGGTTGGCCACCAAGCACTTTCGTCCAGACTTAATTCTGGGAGAGGGTGGTTTTGGAGTTGTGTATAAAGGAGTGATAGATGAAAATGTAAGGCCAGGTTACAAGACCACACAGGTTGCTATTAAAGAGCTAAATCGAGAAGGAATTCAGGGTGATAGGGAATGGCTGGCTGAAGTTAACTATTTAGGCCAGTTCAGTCACCCAAATCTTGTAAAGCTTATTGGATATTGTTGTGAGGATGAACATCGGTTACTGGTCTATGAATACATGGCAAGTGGGAGCTTGGAGAAACACCTTTTTCGCAGAGTGGGCTCAACGCTTACTTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCAAAAGGGCTTGCTTTTCTTCATGGTGCAGAGAGGCCCATCATATATCGTGACTTCAAGACATCAAATATTTTGCTAGATGCGGATTTCAACGCAAAGCTTTCAGACTTTGGTCTTGCAAAGGATGGACCTATGGGAGACCAAACCCATGTTTCAACACGTGTGATGGGCACATATGGATATGCTGCGCCTGAGTATGTGATGACTGGGCATTTAACAGCTCGAAGTGATGTGTATGGTTTTGGGGTAGTGCTGCTTGAGTTGCTTATTGGAAGGAGAGCATTAGACAAAAGCAGGCCCAGCAGACAACACAACTTGGTTGAGTGGGCACGTCCACTGTTGAATCATAATAAGAAAGTCCTTAAAATCTTAGACCCTAGAATGGATGGCCAATATTCAGCTAAAAGTGCAATAAAGGTGGCCCATCTGGCAAACCAATGTCTTAGCCAAAACCCAAAAGGTAGGCCTCTAATGAGTCAGGTTGTTGAAATTCTTGAAAATTTTCAGTCAAAGGAGGAAAATGAAGAAGAGCAAATGCTTCGAATTGGCAGTAGCAGTATAACCCTTTATGAGGTTCCAAATGACACTAGAGAAACTCCAGCAACTTGA 1332 0.4302 MDQEPQAKKIVVGIDEGEEYPKNISEDFGRKKDEGRSAAIDSEQRRXWLTMALWSLVCLEVQIRFMGICFSIDSDTKAPGYESVTPTKQDRSRSYTSSPMNIKDLRQSPGYRNVDIFSYDELRLATKHFRPDLILGEGGFGVVYKGVIDENVRPGYKTTQVAIKELNREGIQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAAKGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSRQHNLVEWARPLLNHNKKVLKILDPRMDGQYSAKSAIKVAHLANQCLSQNPKGRPLMSQVVEILENFQSKEENEEEQMLRIGSSSITLYEVPNDTRETPAT 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0750 443 Pfam Protein tyrosine and serine/threonine kinase 134 406 IPR001245 GO:0004672|GO:0006468
Lele45g0750 443 FunFam Probable serine/threonine-protein kinase PBL8 212 425 - -
Lele45g0750 443 Gene3D Transferase(Phosphotransferase) domain 1 212 429 - -
Lele45g0750 443 ProSiteProfiles Protein kinase domain profile. 129 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0750 443 ProSitePatterns Protein kinases ATP-binding region signature. 135 164 IPR017441 GO:0005524
Lele45g0750 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lele45g0750 443 PANTHER OS01G0588500 PROTEIN-RELATED 94 410 - -
Lele45g0750 443 FunFam Serine/threonine-protein kinase BIK1 96 211 - -
Lele45g0750 443 CDD STKc_IRAK 135 409 - -
Lele45g0750 443 SUPERFAMILY Protein kinase-like (PK-like) 108 407 IPR011009 -
Lele45g0750 443 Gene3D Phosphorylase Kinase; domain 1 104 211 - -
Lele45g0750 443 MobiDBLite consensus disorder prediction 80 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0750 Lele-ChrLele45 8378258 8386943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0750 117 406 Glycoside Hydrolase AT3G07070 51.536 1.28e-99 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele45g0750 PK_Tyr_Ser-Thr 9.9e-48 CL0016