Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0742 ATGAATCGGGGATTTAAGCTGCCAAGATGGCTGCCAGTTTTGCATCTTAATGTTCTCGTGGTACGAGCTTCTCCATCGAGATCTCGATATAGCAATCATCTTGCCCGTTGGTTTGCTTATAAATCTCCTCTCTCTCCTGTCGAGGAGAACAGGCATTGTCAACTAACGGCTTCTTCCAATCGTTCGCTTTTTCATACTTCGTCAATCCATTTTGTTCATTCCTGGCGGTCTTTCTTCGTGGAATCCGTTGGAGGAAGCTTTATTCTTCTCAGTTATGTGTCCAGGATATTGTTTATGTCAGTTTTCACTTTTGTTATTTGGATTTCAGCTGCCAAGATGGCTGCAATTTTTGCATCTAAATGTTCTCGTGTGGGCCATTCTCTGCTTGGTGGGCTTGGCAATAGTTTATCTGGTTTAGTCACCACATCACAAGCGATCGTATGCAGCAAATTCTTATCTCAGCAACAACGCACTTTCATACAGATGAGGACTGTTCTCAAGGTTGTGGATAATTCCGGGGCTAAGAAGGTTATGTGCATACAACCTCTGAAAGGGAGGAAAGGGGCAAGATTGGGCGACACCATAATTGCATCCGTAAAGGAAGCCCATCCTAATGGAAAAGTTAAAAAAGGAAAAGTCGTGTACGGCGTGGTTGTGCGTGCGGCAATGCAAAGGGGGCGATGTGATGGCAGTGAGGTCAAGTTTGATGATAATGCCGTTGTGCTTGTTGACAAGCAAGGGCAGCCGATTGGGACGAGAGTTTTTGGGCCAGTCCCACATGAACTGAGGATGAAGAAACATGTTAAAATACTTACTTTAGCAGGGCACATTGCTTAA 837 0.4468 MNRGFKLPRWLPVLHLNVLVVRASPSRSRYSNHLARWFAYKSPLSPVEENRHCQLTASSNRSLFHTSSIHFVHSWRSFFVESVGGSFILLSYVSRILFMSVFTFVIWISAAKMAAIFASKCSRVGHSLLGGLGNSLSGLVTTSQAIVCSKFLSQQQRTFIQMRTVLKVVDNSGAKKVMCIQPLKGRKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRMKKHVKILTLAGHIA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0742 278 SUPERFAMILY Ribosomal protein L14 160 277 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele45g0742 278 FunFam 50S ribosomal protein HLP, mitochondrial-like 159 278 - -
Lele45g0742 278 TIGRFAM rplN_bact: ribosomal protein uL14 160 277 IPR005745 GO:0003735|GO:0006412|GO:0015934
Lele45g0742 278 ProSitePatterns Ribosomal protein L14 signature. 216 242 IPR019972 -
Lele45g0742 278 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 160 277 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele45g0742 278 Hamap 50S ribosomal protein L14 [rplN]. 159 278 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele45g0742 278 SMART Ribosomal_L14_2 159 278 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele45g0742 278 Gene3D Ribosomal protein L14 159 278 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele45g0742 278 Pfam Ribosomal protein L14p/L23e 160 277 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0742 Lele-ChrLele45 7488985 7498108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0742 170 261 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 34.694 1.14e-08 50.8