Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0741 ATGGAGATAAGCCGAATTGGATACTTCATGGAAAGGGTTTTTCCGGAACAGGATGTACTTCCGTTGGTTCATTCGCTCTTGCTTGTCATGAATACACACTCTGACTCAGCAACATTTCTGATTATATACCATTTCGAGCATCTACGTTCATGATCTAGACAGTGCTACCAAGCTGCAGAATGTTGTAAGAAGCCAATGGGAGCTCAAAGAAAAACGGCTCCTCAGCTTCGTGCCCTTCATAATTTTTATAAAGAGGAGAAGTATCCAACACAGAGAGCAATGAAGGACTTTGCGGGTGCTTTGGGGTTGACACATAAGCAAGTTCGAGATTGGTTTGTTGAGGAAAGGAGGAGAGAGAAGGAAAATGGAGTGTTAGTAGCGTCATGTTCTTCTTCGGAAGCTAATTCTCCTTCATTTACAGGATACAATGCAGTTATAAATAGGAATGTTAAGAAGCAGAAAAGTCATCAAGAGTTGCTTACGGCAAACTACATTCTAAAAAAGGTGTACCACAAGGGTGGCCCTTCTCTAGATGAGGAATTTGATTCTCTTCCTCCAGGTCCATCCCTCCATCATGTTGGTCTGAACACTTCCTCTTCTGCTAGTGAAGAAGACCAAGGACCAATTAAAAAGAGAAAGGTTTCCAAGAGCGCAATTGGAAGTCCCCCTGAATCAAATAAGAAAGCACCATTGAGAAAACATGGTATTGGAAAAGGTTTAATGACAGTATGGAGGGCTACAAATCCAGATGCGGGAGATGTTCCTATTGGCCTTGGTCTTGGTGATAAGCCACGGAAAACACTAACCAATGCTGGAAGACAAAAAGCTAAACTACAGAATGTGAGAAATAAAATACAAGAAAAGAGGAAGGCTTTCATGCAAAGAAGAGTGGTAAAATATAACCAGGATGTGAGTCAGAATCAACCGCAGAAGGAGAAATGTGAACTTGTTTTGGGTAGATTTATGCCTGAGGAGGATCTTGATCGAATGTCATTTTTAATTGATGATGAAGAGCTAGAGATGAGAGAGTTACAAGCAGGACCAGATCCGCATATGTTTTCTGATCATCGTGCTTCCAGTGGAATTCTTGGCTGCTCTCTTTGTAAAGATGTGCTGTCTAAGTTTCCCCCAGATACTGTTGAGATGAAGAAACCCATCTGTTTGCAACCTTGGGACTCCTCTTCAGAAACTGTCAAGAAACTTTTTAAGGTATTCCATTTTCTTTATACATATGCTACTGTTGTTAATATTTCCCCCTTCACTCTTGATGAGCTTGCTCAAGCGTTTCATGATAAGGAGTCAATGCTACTTGGAAAGATTCATGTGGCCCTTCTTACACTTCTTCTGTCTGACATTGAAGTGGAACTTACTAGCGGATTTCCGCCTCATTTAAATAAGTCATGCAATTTTCTTGCATTGCTTCACTCGGTTGAAAATCAAGAATATTCTCTAGCCTTCTGGAAAAGATCTCTTAATCCCCTTACATGGATAGAAATACTCCGACAAGTTTTGGTTGCTGCGGGTTTTGGTTCAAAACAATGTTCTTTGCAAAGAGAAGCGCATAACAAGGAATTGAATCTCCTAGTAAAGTTTGGCTTATGTGCTGGTACTTTGAAGGGCGAGTTGTTTAAGATTTTGTTAGCACAAGGAAATAATGGGTCAAAAGTATCTGAGCTGGCAAAGTCAATGCAGATTGTTGAATTGAACCTTGCCAGCACAACAGAGGAGCTGGAATCTTTAATATATTCAACCCTGTCAAGTGACATTACTTTATTTGAAAAGATTTCATCATCTGCATATCGACTGCGCACGAGCTCTTTTAAGAAGGATGTTGATGATATTCAGTCAGATACAGAAGACTCGGGAAGTGTAGATGATGAACTTAATCACAGTTCTACATGGAGCAGTGGTGAGGATTTTGAATGTGATTCAGCGAACTTCAACTTAAGGAAATTGAAGCGTGGAAGCAACTCTACAATGAAAAATAATATGCTTACAGCATCCACTGAAATTGATGAGAGCCATCCGGGAGAAGTGTGGCTGTTAGGATTGATGGAGAGTGAGTATTCAGATTTGAGCACTGAAGAAAAGTTGAATGCATTAGTGGCTCTTACTGATCTTCTTTCTTTTGGGTCCAGCATAAGGATGAAGGATCCAACAGAAGTTACTGCTGGTTACAGTTTGAGCATCCAGTTACGTGGTTCTGGAGCAAAAATAAAGAGGTCAATAGTAAAGAAGCCTGGGTCATATAATCAGATTAGACCCATGCATTATGTTAAAGAAGGGCATTCATCATTGAATCCTCACTCCTATCCAGTGGATTCCTCATTATTATTCTCAAATATCCACAATGAGGAGGAATCCTTTGAGATGGAGAATGGAGCAACTGAAATAGGTTTAACCAATTCACACCCCATTCAATCAGTGTTTTTGGGATCTGACCGCAGGTACAATAGATACTGGCTTTTCTTAGGGCCTTGCAATGCGGGTGACCCTGGCCATAGGAGAGTTTACTTTGAATCTTCTGAAGATGGTCACTGGGAAGTGATTGATAATGAAGAGGCTTTATGTACTTTGTTGTCAGTTTTGGATGATAGAGGTAAACGGGAGGCACTTCTTGTTGAATCTTTGGAGAAGCTGAAAGCCCCTCTTTGCAGAGCCATGTCCAAGATGATGGTCAACCATACTGGAATGTGTCATACTTCAAATTCTGAGCAATCTGATCTTGATAGGATCACAGAGGACAGTTATTCTCCAATATCTGATGTAGATAACCTGAGCCTGATTGAGACAGCCAGTGACTCTCTACCTTCAGCTGGCGCTGTGGTAATTGAAGCTGGGAAAAAGGGAGCAGAACAAATGCAAAAGTGGATCCGTCTTCAAGCATATGATTCATGGATTTGGAATTCCTTTTATTTAAATCTCAATGTTGTGAAATATGGTAGAAGGTCTTATATTGATTCTCTGGCCAGATGTGAGAGTTGTCACGATCTATTCTGGAGGGATGAGAGACACTGTAAAATTTGCCATTTGACATTTGAGCTTGATTTTGATCTTGAAGAAAGATATGCAATCCACACAGCCACGTGCAAGGAGAAAGAAGACAGTAACACTTTTCCAAATCACAAAATCTTATCATCGAAGATCCAGTCACTGAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGTAGATGCGTTGGTGGGTGCTTGGAGGAAGTCTGCTCACAAGCTATGGGTCAGAAGACTCAGACGCACTTCAACTTTAACGGAGCTTTTTCAGGTTGTTGCTGATTTCGTTGGTGCTATCAATGAGGATTGGTTGTGTCGGTGCAGTCTTCCTGATGGTGTGGTTGATAAAATCATTGCTTCTTTTTCATTTATGCCCCTTACTTCATCAGCTCTTGCTCTATGGTTAGTGAAGTTGGATGCCATAATCGCTCCCTACCTGGACGAAGTCCAGCCTCTCAAGAAGCAGGACATTACTAAGAGAAAATTCTCTGGTGGACTTTAA 3516 0.4096 MEISRIGYFMERVFPEQDVLPLVHSLLLVMNTHSDSATFLIIYHFEHLRSXSRQCYQAAECCKKPMGAQRKTAPQLRALHNFYKEEKYPTQRAMKDFAGALGLTHKQVRDWFVEERRREKENGVLVASCSSSEANSPSFTGYNAVINRNVKKQKSHQELLTANYILKKVYHKGGPSLDEEFDSLPPGPSLHHVGLNTSSSASEEDQGPIKKRKVSKSAIGSPPESNKKAPLRKHGIGKGLMTVWRATNPDAGDVPIGLGLGDKPRKTLTNAGRQKAKLQNVRNKIQEKRKAFMQRRVVKYNQDVSQNQPQKEKCELVLGRFMPEEDLDRMSFLIDDEELEMRELQAGPDPHMFSDHRASSGILGCSLCKDVLSKFPPDTVEMKKPICLQPWDSSSETVKKLFKVFHFLYTYATVVNISPFTLDELAQAFHDKESMLLGKIHVALLTLLLSDIEVELTSGFPPHLNKSCNFLALLHSVENQEYSLAFWKRSLNPLTWIEILRQVLVAAGFGSKQCSLQREAHNKELNLLVKFGLCAGTLKGELFKILLAQGNNGSKVSELAKSMQIVELNLASTTEELESLIYSTLSSDITLFEKISSSAYRLRTSSFKKDVDDIQSDTEDSGSVDDELNHSSTWSSGEDFECDSANFNLRKLKRGSNSTMKNNMLTASTEIDESHPGEVWLLGLMESEYSDLSTEEKLNALVALTDLLSFGSSIRMKDPTEVTAGYSLSIQLRGSGAKIKRSIVKKPGSYNQIRPMHYVKEGHSSLNPHSYPVDSSLLFSNIHNEEESFEMENGATEIGLTNSHPIQSVFLGSDRRYNRYWLFLGPCNAGDPGHRRVYFESSEDGHWEVIDNEEALCTLLSVLDDRGKREALLVESLEKLKAPLCRAMSKMMVNHTGMCHTSNSEQSDLDRITEDSYSPISDVDNLSLIETASDSLPSAGAVVIEAGKKGAEQMQKWIRLQAYDSWIWNSFYLNLNVVKYGRRSYIDSLARCESCHDLFWRDERHCKICHLTFELDFDLEERYAIHTATCKEKEDSNTFPNHKILSSKIQSLKAAIYAIESVMPVDALVGAWRKSAHKLWVRRLRRTSTLTELFQVVADFVGAINEDWLCRCSLPDGVVDKIIASFSFMPLTSSALALWLVKLDAIIAPYLDEVQPLKKQDITKRKFSGGL 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0741 1171 Pfam Homeodomain 71 120 IPR001356 GO:0003677
Lele45g0741 1171 Pfam DDT domain 396 451 IPR018501 -
Lele45g0741 1171 MobiDBLite consensus disorder prediction 176 236 - -
Lele45g0741 1171 SMART HOX_1 64 126 IPR001356 GO:0003677
Lele45g0741 1171 ProSiteProfiles DDT domain profile. 395 454 IPR018501 -
Lele45g0741 1171 ProSiteProfiles 'Homeobox' domain profile. 72 122 IPR001356 GO:0003677
Lele45g0741 1171 Coils Coil 268 295 - -
Lele45g0741 1171 SMART testlast3 395 454 IPR018501 -
Lele45g0741 1171 MobiDBLite consensus disorder prediction 613 632 - -
Lele45g0741 1171 Gene3D - 58 137 - -
Lele45g0741 1171 PANTHER HOMEOBOX PROTEIN SIX 286 1153 - -
Lele45g0741 1171 SUPERFAMILY Homeodomain-like 69 122 IPR009057 -
Lele45g0741 1171 CDD homeodomain 69 120 IPR001356 GO:0003677
Lele45g0741 1171 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 676 712 IPR028942 -
Lele45g0741 1171 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 807 880 IPR028941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0741 Lele-ChrLele45 7455689 7470166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0741 71 187 Homeobox Transcription Factor Family AT5G44180 26.712 4.53e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele45g0741 WSD 4.9e-13 No_clan