Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0734 ATGCCCAGACTCACGCCCGCTATGTCTTCCGATTTAGATGAGTGCGGGGAGCAGCTGAGGCTAACGGTAGATGTGGATGCTCGGACTCAGATTGACAAGCCTTCCAAATTTCAAATTCGAAATCTCACCAAAGTCTCTGATGCCGGAGTTATGATTCTCAAGGGTATCGACTTGGACGTTCCCAAGGGCGTGATACTCGGCGTCATCGGACCCAGCGGTAGCGGCAAATCGACCCTTCTCAGGGCCTTGAACCGCCTCTGGGAGCCTCCCTCCGGCACCGTCTTTCTCGATCATAAGGATATCTGCGATCTCGATGTTCTCTTCCTCCGCCGTAAGGTCGGCATGCTCTTTCAGCTCCCTGCCCTCTTCGAAGGCACGGTGGCAGACAACGTGAGGTATGGGCCACAACTAAGAGGGAAAAAGCTAAGTGATGAAGAGGTACGCAAGTTGCTGATAACAGCAGACCTTGATGCTTCTTTCATGAACAAGAAGGGCTCTGAACTATCTGTGGGTCAAGCTCAACGAGTTGCACTTGCCAGGACTTTAGCTAATTCGCCAGAGGTTTTACTGCTGGATGAGCCAACAAGTGCGCTAGATCCAATATCAATAGAGAACATAGAAGATGCTCTAATGAAGCTGAACAAGAACAATGGTATGACAGTGATAATTGTCTCTCACAGCATCAAACAGATCCAGAGGATAGCTGACTTGGTGTGCCTTCTTGTTGATGGTCAAATTGTTGAAGTTCTAAAGCCTGATCAACTGTCCCAAGCCACTCATCCCATGGCCCAAAGGTTTCTTCAACTTAGTTCCTAG 816 0.4926 MPRLTPAMSSDLDECGEQLRLTVDVDARTQIDKPSKFQIRNLTKVSDAGVMILKGIDLDVPKGVILGVIGPSGSGKSTLLRALNRLWEPPSGTVFLDHKDICDLDVLFLRRKVGMLFQLPALFEGTVADNVRYGPQLRGKKLSDEEVRKLLITADLDASFMNKKGSELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISIENIEDALMKLNKNNGMTVIIVSHSIKQIQRIADLVCLLVDGQIVEVLKPDQLSQATHPMAQRFLQLSS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0734 271 FunFam ABC transporter, ATP-binding protein 34 266 - -
Lele45g0734 271 SMART AAA_5 62 253 IPR003593 -
Lele45g0734 271 Gene3D - 32 270 IPR027417 -
Lele45g0734 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 258 IPR027417 -
Lele45g0734 271 ProSitePatterns ABC transporters family signature. 168 182 IPR017871 GO:0005524|GO:0016887
Lele45g0734 271 CDD ABC_PstB_phosphate_transporter 37 255 IPR005670 GO:0005315|GO:0016020|GO:0035435
Lele45g0734 271 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 22 270 IPR005670 GO:0005315|GO:0016020|GO:0035435
Lele45g0734 271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 268 IPR003439 GO:0005524
Lele45g0734 271 Pfam ABC transporter 53 196 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0734 Lele-ChrLele45 7242797 7246407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0734 50 269 Calmodulin-binding Proteins AT2G36910 31.466 4.27e-30 117