Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0726 ATGGCGAGAAAGTGCTCGCATTGTGGGAAAATAGGGCATAATTCTAGGACTTGCACATCTTTTAGAAGAACTTGTGTAGGACTTCGTCTCTTTGGTGTTCTGCTTGAAACATCTTCTCCTTCTTCTTATGCTTCTTCTTCTTGTGTTTTCGCCATGAAGAAAAGCTTGAGCATGGATTCTTTACCAGCTTCATCATCGTCATCTTCCCCGTCTTCATCGTTCTCTAATTCATCAAGAATCACCATTGATGAAAACTCTGCGGCAGAGAGATCCTCTGTTGAGTATCTATCAGATGGTCTAATAGATGCTGCATCAGCACAAGACAGAAGAAAAGGAGTAGCTTGGACAGAAGATGAACACAGAAGATTCCTGGTTGGACTTGAGAAGCTAGGAAAAGGAGATTGGAGAGGAATCTCGAGAAATTATGTCACAACAAGAACGCCTACTCAAGTAGCTAGTCATGCTCAAAAATACTTTCTCCGGCTTGCCGCCTTCAACAAGAACAAGAGACGATCAAGCCTCTTCGACATGGGGGGAATACAAGAGGATGTTAAATCTGGAAGCTCCAATAATAAGTGTGAAGAAGATGCCCTGCAGAATGATACTAGCTTGACATTGATGGACCAAAAGGGAACTAAATCTGAAGCAATAATAGTGCCTAAATGGCAGAATAATAATTCCCATATGATGAAATCTTCTTCTTTTTCCCCCACATCATCATCGCCTGATCTGGAGCTCACACTTGCAGCACCCAAGTCCTTGCAACAAAATGGATCATCATCTTCTTGTTTTCTTCTAAGCTCTATTTGTGTCACCTAA 819 0.4176 MARKCSHCGKIGHNSRTCTSFRRTCVGLRLFGVLLETSSPSSYASSSCVFAMKKSLSMDSLPASSSSSSPSSSFSNSSRITIDENSAAERSSVEYLSDGLIDAASAQDRRKGVAWTEDEHRRFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLAAFNKNKRRSSLFDMGGIQEDVKSGSSNNKCEEDALQNDTSLTLMDQKGTKSEAIIVPKWQNNNSHMMKSSSFSPTSSSPDLELTLAAPKSLQQNGSSSSCFLLSSICVT 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0726 272 Gene3D - 113 165 - -
Lele45g0726 272 SMART sant 111 161 IPR001005 -
Lele45g0726 272 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 111 161 IPR006447 GO:0003677
Lele45g0726 272 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Lele45g0726 272 PANTHER TRANSCRIPTION FACTOR KUA1 3 226 - -
Lele45g0726 272 Pfam Myb-like DNA-binding domain 114 159 IPR001005 -
Lele45g0726 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 163 IPR017930 -
Lele45g0726 272 ProSiteProfiles Myb-like domain profile. 107 159 IPR001005 -
Lele45g0726 272 ProSiteProfiles SANT domain profile. 115 163 IPR017884 -
Lele45g0726 272 SUPERFAMILY Homeodomain-like 109 162 IPR009057 -
Lele45g0726 272 FunFam transcription factor MYB1R1 113 164 - -
Lele45g0726 272 CDD SANT 114 159 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0726 Lele-ChrLele45 6973596 6974959 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele45g0726 Myb_DNA-binding 2.4e-11 CL0123