Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0715 ATGCGTTTATCTACTATAACTTTCTTGATTCACAAGCGAAATGCTCAAATTCGTATGATTGAAGATGTTAATTTCAAAGAGACTCTTCGTCTTCCTCATGCTCTTCCTTGGTCTTACAATTTCAGCTCGTGGACAGCAAGACAGAGGTTAGCATTTGCTTGAACAGTTTTGCATTTGATAAGGGCTTCTTTCTTGTATGGAATCTATGATGGAGAAAACAATCTTCCAGAATTTGATCTGTATGCGGATGTCAATTTCTGGTCCTCAGTTACATTCAGAAATGCTTCAGAGCAACTCATAATGGAAATCATTAGCTTGAAAGTATCAGAGATTAATGTTTGTCTTGTAAACAAAGGATTGGGAATTCCTTTCATCTCAGCATTGGAACTTAGACCAATTCTTTATGGCCCTATTTATGGCACTGAATTTGGTTCATCTGCTTCACTTTTACTCTTCAAAAGATGGGACATTGCATCTCTCAATGGAAGTGGAAGATATGAAGATGATTTTTATGATAGAATTTGGTCTCCTTACAGTTCATCTTCTTGGGAAACTTTGGATACTTCTTCAGCCATTAATGGTAGTAACAGTTGCCATAATGCGCCATTTGAAGTCATTAGGACTGCTATTAGTCCTAAGAATGAGAGTTCTCCTTTGGAATTCTCCTGGAAACCAAATGATCCGAACTCGAAATTTTATGTGTTTTTGTACTTTGCTGAAGTTGAGAAGCTTCAGAAAGAACAACTGAGGAAATTCAATATAGGACCCTTTGTCCCTAGTTACTTAAACGCAACCATTGTGTCGAATTCAAAATCCTTGGTGGGAAATGAACATCAAATTTCAATTTCAAGAACAGAAGACTCAACCTTACCACTCGTCCTCAATGCAGTTGAGATTTATGTCGTAACCAACGTTAGAACAAGATGGACTGCAGTTGGGATGGCTTGGAATGTAACTACAGTAACTCGCTTACACCACGAATCATATCCCTTTACGGAGATAGAAAAGGCCAATAAAGGTGGAAGAAGAACTATAGCATCAAAAAAGTGGCAATATAGCTATGAAGAGATTTTGGAAATCACCAACAACTTTGAAATGGCAATTGGAAAAGGAGGATTCGGAATAGTGTACCGTGGTGAGTTGAAAGATGGGAACCAAGTTGCAGTGAAAATGTTTCTCCATCATCATCTCAGGGACCAAAGGAATTTCAAATTGAGAAATTTGGTATCCTTCATTGGTTATTGTGATGATGATAACAAGATGGCACTAATTTATGGGTACATGGCCAATGGCAACCTGAAGAATTATCTGAGAGACATGCTTGAAGTACTTCTGGTCTGCAGGAGTCTGAGCTCATGGGCACCACAGGCTACCTTGACCCAGAAATTGCTTCGCATAAGTGATATTTATAAATTCAATGCACGTTCTGTGGAAAAACCTTTAGGAATAGCAATGGCATGTAGTGCATCACCCTCCATTCACAGACCTACTTTGAATTTTGTAGTACAAGAGCTTAAACAGTGTTTGGAAATGGAGTGTCCTTCTCACAGTGACAGATTCGATGGTACCAAGGCGGGTTTATAG 1584 0.387 MRLSTITFLIHKRNAQIRMIEDVNFKETLRLPHALPWSYNFSSWTARQRLAFAXTVLHLIRASFLYGIYDGENNLPEFDLYADVNFWSSVTFRNASEQLIMEIISLKVSEINVCLVNKGLGIPFISALELRPILYGPIYGTEFGSSASLLLFKRWDIASLNGSGRYEDDFYDRIWSPYSSSSWETLDTSSAINGSNSCHNAPFEVIRTAISPKNESSPLEFSWKPNDPNSKFYVFLYFAEVEKLQKEQLRKFNIGPFVPSYLNATIVSNSKSLVGNEHQISISRTEDSTLPLVLNAVEIYVVTNVRTRWTAVGMAWNVTTVTRLHHESYPFTEIEKANKGGRRTIASKKWQYSYEEILEITNNFEMAIGKGGFGIVYRGELKDGNQVAVKMFLHHHLRDQRNFKLRNLVSFIGYCDDDNKMALIYGYMANGNLKNYLRDMLEVLLVCRSLSSWAPQATLTQKLLRISDIYKFNARSVEKPLGIAMACSASPSIHRPTLNFVVQELKQCLEMECPSHSDRFDGTKAGL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0715 527 PANTHER OS07G0107800 PROTEIN-RELATED 27 317 - -
Lele45g0715 527 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Lele45g0715 527 SUPERFAMILY Protein kinase-like (PK-like) 346 443 IPR011009 -
Lele45g0715 527 Pfam Protein tyrosine and serine/threonine kinase 365 454 IPR001245 GO:0004672|GO:0006468
Lele45g0715 527 Pfam Malectin-like domain 57 301 IPR024788 -
Lele45g0715 527 SMART tyrkin_6 362 520 IPR020635 GO:0004713|GO:0006468
Lele45g0715 527 Gene3D Phosphorylase Kinase; domain 1 334 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0715 Lele-ChrLele45 6498398 6503746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0715 229 437 Receptor kinase-like Gene Family AT4G29180 32.759 2.42e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele45g0715 Malectin_like 6.4e-66 CL0202