Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0695 ATGTTGAATCCTCATTGCATTTGCTTTCTTCTTCTTGTTCTTTTTCTTCTGCAAAATCCTTCAGCAACATTGTGCCATACCAAGGGACTTAGACCCGGCCGGCATACTTATTCGGGTCCTGGGTTATCCATCAACAGGACCCAAGTCCAGAATTCGGAGCAGCAATTCACAAGATGGGTTAACTTTGTTGGTAGTCTCAAGCATTCTGTGTTTAAGACTGCAAAAAACAAGCTTTTTGCTTCTTACACTCTTCACGTTTCTAAGAATCCTGCCGTAGCAGATTTTGCAACTATTCAAGAAGCCATTGATTCTCTTCCTTCCATTAATCTCGTGAGAGTAGTTATTAAGGTTCATGCAGGTGTTTACACTGAGAAAGTGAACATTCCTCCTATGAAATCCTTCATAACCATGGAAGGAGCAGGAGCAGATAACACCATAGTTCAATGGGGTGACACAGCTCAAACACCAGGTCCCAGAGGACAACCATTAGGAACATACGGTTCCGCAACATTTGCAGTGAACTCGCCTTATTTTATCGCCAAGAACATAACATTCAAAAACACAACCCCAGTTCCAGCACCAGGAGCAGTAGGGAAACAAGCAGTGGCATTAAGAATATCAGCAGACACAGCATCATTCTACGGATGCAAATTCCTAGGAGCACAAGACACATTGTATGACCATGTAGGAAGGCATTATTACAAGGATTGCTACATCGAAGGCTCGGTGGATTTCATATTCGGGAACGCGCTGTCTCTGTTCGAGGGGTGTCACGTGCATGCAATAGCACAGAGGTTAGGGGCGTTAACAGCACAAGGAAGAAGCAACATAATGGAGGACACAGGGTTCTCATTTGTGAACTGTAAGGTCACGGGTTCAGGAGTGATATACCTTGGAAGGGCTTGGGGTCCATTTTCTCGTGTGGTTTTTGCTTACACTTACATGGACGACATCATCATTCCCAAGGGCTGGTATAACTGGGGCGACCCTAACCGTGAAATGACAGTATTCTATGGACAGTACAAGTGCACAGGACCAGGAGCTAGCTTTGCAGGCAGAGTATCATGGTGTAAAGAACTCACCGGTGAGGAAGCTAAGCCTTTTATTTCCCTTAGCTTCATTGATGGTGATGAGTGGACCAGATTGTAG 1149 0.4482 MLNPHCICFLLLVLFLLQNPSATLCHTKGLRPGRHTYSGPGLSINRTQVQNSEQQFTRWVNFVGSLKHSVFKTAKNKLFASYTLHVSKNPAVADFATIQEAIDSLPSINLVRVVIKVHAGVYTEKVNIPPMKSFITMEGAGADNTIVQWGDTAQTPGPRGQPLGTYGSATFAVNSPYFIAKNITFKNTTPVPAPGAVGKQAVALRISADTASFYGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQRLGALTAQGRSNIMEDTGFSFVNCKVTGSGVIYLGRAWGPFSRVVFAYTYMDDIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVSWCKELTGEEAKPFISLSFIDGDEWTRL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0695 382 FunFam Pectinesterase 80 382 - -
Lele45g0695 382 Pfam Pectinesterase 93 377 IPR000070 GO:0030599|GO:0042545
Lele45g0695 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 74 380 - -
Lele45g0695 382 SUPERFAMILY Pectin lyase-like 80 380 IPR011050 -
Lele45g0695 382 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Lele45g0695 382 Gene3D - 80 382 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0695 Lele-ChrLele45 5957046 5961946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0695 93 379 Carbohydrate Esterase AT5G47500 50.347 1.63e-102 305