Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele45g0694 | ATGGGGAGAGCAACAAGGTGGTTGAAGGGGTTGTTTGGGATGAAGAAAGACAGAGACAAAAAACAGAACTCAAACCCCGACCACAGTGGGAATTTGAAATATGCAGCGCCACCACCGTCGGCGGCATCTGCAGAAGCTGCTTGGCTTCGATCATTCTACGGAGAAACAGAGGACCAGCAGAACAAGCACGCCATTGCAGTGGCTGCAGCCACCGCCGCAGCCGCTGACGCCGCAGTCGCAGCCGCCCAGGCGGCAGTAGCTGTAGTGCGGCTGACCAGTCACGGCAGAACCACCACCGTAGTCAGCCGTGGACACGAGAAATTGGCCGCCGTGAAGATTCAAACAGTATTCAGGGGATTCCTGGCAAGGAAGGCATTAAGAGCTTTGAAAGGATTAGTAAAGATTCAAGCACTTGTGAGAGGATTTCTAGTTCGAAAGCAAGCAACTGCAACGCTTCACAGCATGCAAGCTCTGATAAGAGCTCAAGCCACAGTTCGATCTCATAAAGCTCGTCAATTCATGAACAAAAACGACGAATCATACAAATTCGAAACTCAAGCTCGAAGATCCATGGAGAGATTGGATGAAAGTCGAAGGCTATCTTCTTCCTTCGACGCTTCCATGAATAACAACAACAGTAACAGTAATGATGGAAGTTCGACGCCGAAGATAGTGGAGGTTGACACAGGCGGCGGCTGCCGGCCGAAGTCGATGTCTCGCCGGAGCAACACATCAATGTCGGATTTTGGCGATGACCCTTTGTTCCAAACACTGTCTTCTCCACTCCCAGTTCCACAAATTCGAACCCCAGCTCGAATATCAATAGCAGATCGGAGGGCTTTGCCGGAGTCGGAGTGGGGATTAACAGGGGAAGAATGTAAGTTCTCTACAGCGCAGAGCACTCCACGTTTCACTAATTCGTGTTCTTGTGGATCACTCGCCGCCACACCAAAGAGTGTCTATGCAGAAAGATTGATATGGCAATATGGAAACCATCCGAATTACATGGCGAATACTCAGTCATCGAAGGCGAAATTGAGGTCTCGGAGTGCTCCGAAGCAACGGCCGGAATCCGGCGCCGGCGGAGGAGCAAAGAAGAGGCTTTCGTTGAATGAAATGATGGAGTCAAGGAGTAGTTTGAGTGGGGTTAGGATGCAGAGGAGTTGTTCAAGAGTTCAAGAAGCCATTAATTTCAAGAATGCTGTGATGGGGAAGATTGAGAGATCCGGAGAGATTGGGAGAGATGGTTACTACTTGCAGAAGAGGTGGTATGGTGATTGA | 1281 | 0.4996 | MGRATRWLKGLFGMKKDRDKKQNSNPDHSGNLKYAAPPPSAASAEAAWLRSFYGETEDQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRTTTVVSRGHEKLAAVKIQTVFRGFLARKALRALKGLVKIQALVRGFLVRKQATATLHSMQALIRAQATVRSHKARQFMNKNDESYKFETQARRSMERLDESRRLSSSFDASMNNNNSNSNDGSSTPKIVEVDTGGGCRPKSMSRRSNTSMSDFGDDPLFQTLSSPLPVPQIRTPARISIADRRALPESEWGLTGEECKFSTAQSTPRFTNSCSCGSLAATPKSVYAERLIWQYGNHPNYMANTQSSKAKLRSRSAPKQRPESGAGGGAKKRLSLNEMMESRSSLSGVRMQRSCSRVQEAINFKNAVMGKIERSGEIGRDGYYLQKRWYGD | 426 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele45g0694 | 426 | ProSiteProfiles | IQ motif profile. | 154 | 182 | IPR000048 | GO:0005515 | |
| Lele45g0694 | 426 | MobiDBLite | consensus disorder prediction | 9 | 38 | - | - | |
| Lele45g0694 | 426 | MobiDBLite | consensus disorder prediction | 184 | 200 | - | - | |
| Lele45g0694 | 426 | Gene3D | - | 107 | 147 | - | - | |
| Lele45g0694 | 426 | ProSiteProfiles | IQ motif profile. | 130 | 157 | IPR000048 | GO:0005515 | |
| Lele45g0694 | 426 | Pfam | Protein of unknown function (DUF4005) | 301 | 390 | IPR025064 | - | |
| Lele45g0694 | 426 | MobiDBLite | consensus disorder prediction | 201 | 223 | - | - | |
| Lele45g0694 | 426 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 375 | - | - | |
| Lele45g0694 | 426 | Pfam | IQ calmodulin-binding motif | 109 | 127 | IPR000048 | GO:0005515 | |
| Lele45g0694 | 426 | Pfam | IQ calmodulin-binding motif | 133 | 147 | IPR000048 | GO:0005515 | |
| Lele45g0694 | 426 | MobiDBLite | consensus disorder prediction | 339 | 384 | - | - | |
| Lele45g0694 | 426 | MobiDBLite | consensus disorder prediction | 236 | 263 | - | - | |
| Lele45g0694 | 426 | MobiDBLite | consensus disorder prediction | 184 | 263 | - | - | |
| Lele45g0694 | 426 | MobiDBLite | consensus disorder prediction | 10 | 26 | - | - | |
| Lele45g0694 | 426 | SMART | iq_5 | 128 | 149 | IPR000048 | GO:0005515 | |
| Lele45g0694 | 426 | SMART | iq_5 | 105 | 127 | IPR000048 | GO:0005515 | |
| Lele45g0694 | 426 | ProSiteProfiles | IQ motif profile. | 106 | 134 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele45g0694 | Lele-ChrLele45 | 5943881 | 5945346 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele45g0694 | 1 | 385 | IQD Protein Family | AT3G16490 | 50.251 | 2.34e-89 | 274 |