LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele45g0679	ATGGAACGGATCGTCGGCGGCAAGTACAAACTCGGCCGCAAGATCGGGAGCGGATCCTTTGGCGAAATTTACCTCGCTACTCATATCGATACTTTTGAAATAGTCGCGGTCAAAATTGAGAACACTAAAACTAAGCATCCACAACTGCTTTATGAGGCAAAACTGTATCACGTTCTTCAAGGAGGAAGTGGAATTCCTAGCATAAGGTGGTCTGGTGTAGACGGGGAGGACAATGTGCTAGTTATTGATTTGCTGGGACCCAGTCTTGAAGATCTGTTTGTGTACTGTGGAAGAAAGTTTTCGTTGAAGACTGTATTAATGTTGGCTGATCAGATGGTCACTAGAATAGAATATATTCATTCTAAGGGTTTTCTACATAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCCAATCAGGTTTACATAATTGACTTTGGGCTTGCAAAACGATATCAGAATCCCACAACCAATCGTCATATTCCTTACCGGGAGAACAAAAACTTAACGGGCACTGCACGTTATGCAAGCTGTAATACTCACCTTGGTATTGAGCAAAGCCGCCGGGATGATTTGGAGTCACTAGGATATGTGCTTTTGTACTTCCTTAAAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAAAAGTATGATAAAATATGTGAAAAGAAAGTATCAACTCCTATTGAGGTCCTAGCCAAATCTCATCCTGTCGAGTTTGCTTCGTACTTTCATTATTGCAACTCTTTGACGTTTGACCAGCGACCTGATTATAGATTTTTGAAGAGTCTATTCCGGGACCTATTTTCTCAACGAGGTTTTGAATTTGATTATGTATTTGATTGGACAATCTTAAAGTACCAGCAGACGCAGAAGATTAAAGTTCAGCCTCACACATCTCCATCTCCTGGAGCGAGCAACTGTCATGAACGGCCAAAGGGTGTTGACAATTCTCATGGTGTTTATGTTTATTCAGGGGATGTCTCGGAGCACATTAGATCTGGAAATGCTACTGGTTCTGGTGTTAAGATGCAGTTTAAATCACCAGCAGGAAAAAATCTAGGTGTTAGTAATCCTCTTGACAAGAATATTTTTGAAGAAGCAAATATGTCTTCTACTTCATATTCACGTGCTGGTACCTCGAAAAGGAACTCCTTGAAGCCTGCCATGACCACGGAATCTGCAAACCCCGGTCATGGCCAAGGCAGTAAAATTGGTCCTTCAAGTAGCTGGATTTCATCTCTGCAACGGATATTAAGACCAAATGAATGA	1296	0.4182	MERIVGGKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENTKTKHPQLLYEAKLYHVLQGGSGIPSIRWSGVDGEDNVLVIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMVTRIEYIHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYQNPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLKGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLAKSHPVEFASYFHYCNSLTFDQRPDYRFLKSLFRDLFSQRGFEFDYVFDWTILKYQQTQKIKVQPHTSPSPGASNCHERPKGVDNSHGVYVYSGDVSEHIRSGNATGSGVKMQFKSPAGKNLGVSNPLDKNIFEEANMSSTSYSRAGTSKRNSLKPAMTTESANPGHGQGSKIGPSSSWISSLQRILRPNE	431

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele45g0679	431	PANTHER	CASEIN KINASE-RELATED	7	373	-	-
	Lele45g0679	431	Gene3D	Transferase(Phosphotransferase) domain 1	1	325	-	-
	Lele45g0679	431	ProSitePatterns	Protein kinases ATP-binding region signature.	15	38	IPR017441	GO:0005524
	Lele45g0679	431	SUPERFAMILY	Protein kinase-like (PK-like)	4	290	IPR011009	-
	Lele45g0679	431	Pfam	Protein kinase domain	9	227	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele45g0679	431	MobiDBLite	consensus disorder prediction	303	322	-	-
	Lele45g0679	431	MobiDBLite	consensus disorder prediction	379	431	-	-
	Lele45g0679	431	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	124	136	IPR008271	GO:0004672\|GO:0006468
	Lele45g0679	431	SMART	serkin_6	9	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele45g0679	431	MobiDBLite	consensus disorder prediction	343	366	-	-
	Lele45g0679	431	ProSiteProfiles	Protein kinase domain profile.	9	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele45g0679	431	FunFam	Casein kinase I isoform delta-like	1	339	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele45g0679	Lele-ChrLele45	5777892	5781666	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele45g0679	9	215	EF-hand Containing Proteins	AT4G23650	30.047	6.76e-15	74.7

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CK1_CK1	Lele45g0679		Pkinase	9.2e-29	CL0016