Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0673 ATGAACAACCAACTGGGTTTTCATGTTTTGGTTCTGTATCTCATAATCTTCAGATTTTTTTTCTGTCAAGCTCAGGTTTCTACTAGTGTTCCTTCTTCACAAGATGTTGTCACAAATTTCCGACCAAGTCTTGCTGTTGTCATAGGAATTCTCAGTTTCATGTTTGTTCTAACCTTCTCTTTCCTCATGTATATCAAGCGCTGTAACAACAGAGGAGCTTCATCAGGTCATGGGAACCCAGAAAGTCAACCTTGGCTTATCAGAACAGCATCAACAAGATTCTCAGGAATCGACACGACTGTCATAGAATCACTCCCTTTCTTCAGATTCTCTTCCTTAAAAGGATCAAAACAAGGCCTTGAATGCGCTGTTTGCTTGAACAAGGTTGATCCTGAAGATCACACCATTTTCACAAACTCAAACAGCTTGAGAATGTTCGTCAATGGTGGCGGCGCAGAACTGGGAGAAGAAGAAACCAACGTAGGGCTTTTTGTTCAGAGCGAGGAAGAAGAACAAAATAATGGGTTATCATCAAGATTCAATTTTGGGAGCAGTTTTAGGAGAATCATGATGATGAAGGGTTCTTCAAATTCAAAAGAAGAAGAATTGCCCATTCAAAAACCAGTTCATGATGGTGATGATCACGGAAAGGTTTATCACAAGCTCAAACACAAGATCACTGTATCAGACTTTGTTTTGCAGAATCGATGGAGCAATCTGAGTTCCTCGGATCTCATGTTCTTGAACTCAGAGATGATTGGTTCTACTTCACGTTTAAGATTCAACAATGGTGATGATAATCAGAATCTGGTTATGATGAATCTCAAGGAGGAGATGGAGAGGAAGGTTTCATTAGAGAACAAAGTGAGCAGAGTACTAAAGAACAACCTTAATTCTTCAGAAAATTTGAGTCAGACATCAAAGAATATGATGAATCAAGATGAGGGAAGAAGATCAGTTTCAGATATAACTGGTGTCTCTAGATTTGAAGATTTGGGAATGAAAAATGGTAATAAAGAAGGTTCATGTTTGGTTGATGATGAGATTCGGAACAATAATGTGAAAGAGGAAAGAGTGAGAAAGATTTGGTTGCCAATTGCCAAAAGAACAGTTCAATGGTTTGTGAACAGAGAGAAAAGGTTTCAGCAATCTCTGAATAATGATGTATAG 1170 0.3846 MNNQLGFHVLVLYLIIFRFFFCQAQVSTSVPSSQDVVTNFRPSLAVVIGILSFMFVLTFSFLMYIKRCNNRGASSGHGNPESQPWLIRTASTRFSGIDTTVIESLPFFRFSSLKGSKQGLECAVCLNKVDPEDHTIFTNSNSLRMFVNGGGAELGEEETNVGLFVQSEEEEQNNGLSSRFNFGSSFRRIMMMKGSSNSKEEELPIQKPVHDGDDHGKVYHKLKHKITVSDFVLQNRWSNLSSSDLMFLNSEMIGSTSRLRFNNGDDNQNLVMMNLKEEMERKVSLENKVSRVLKNNLNSSENLSQTSKNMMNQDEGRRSVSDITGVSRFEDLGMKNGNKEGSCLVDDEIRNNNVKEERVRKIWLPIAKRTVQWFVNREKRFQQSLNNDV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0673 389 Coils Coil 275 295 - -
Lele45g0673 389 MobiDBLite consensus disorder prediction 297 320 - -
Lele45g0673 389 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 128 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0673 Lele-ChrLele45 5740124 5741407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0673 12 382 C3H Transcription Factor Family AT4G28890 39.908 4.13e-72 230