LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele45g0668	ATGGCTGAGTCACTTAACTCGGAGGCTGATACTGCGCCTTCATCGTCTCACTCATCATTACCCAACTCTTCTTCTTCTCCTTCTTATACGTCTTCGTCTTCGTCTTCGTCTTCTTCTTCTTCTGCTCTACAGAAGAATCTGAAGCGAGCCAGAGAAGATAGTAATAATAACAGCAAGCACCCTGTTTACAGAGGAGTCCGAATGCGAACGTGGGGTAAATGGGTCTCCGAAATCCGCGAACCCAGAAAGAAAAATCGGATCTGGCTCGGCACTTTCGCCACCGCCGAGATGGCTGCCCGTGCCCACGACGTCGCCGCCCTCAGCATTAAAGGCAGCTCCGCCATCCTCAACTTCCCTGAGCTCGCCGCTTCCCTGCCCCGACCCGCCTCTAAATCTCCCCGAGATGTTCAATCCGCCGCCGCCAAAGCTGCCTCCATGGAGATACTCAACATCAATCCCGCCCCCACAACCTCTTCGTCGTTACCCGCTCTGTCTTCCTGCTCCGGCGATGTTTCCACCCCAGAGGAACTTGGCGAGATAGTAGAACTCCCATCACTGGGTACCAGCTTCCAAGAACCCGACCCGAATAATGATTTCGTGTTTTTCGACCTGGTAGAGGGGTGGTCCTATCCTCACCCATGGTATAACAATCTCTATGATGATGAGAACAAGTACTGTGGTGGGTATTTCACCACATCAATGCAAGAAGAAGAAACAGAGGGTTTGATTCTTTGTGGCTTTGATGGCTCATTGTGGCAACATTAG	765	0.5163	MAESLNSEADTAPSSSHSSLPNSSSSPSYTSSSSSSSSSSSALQKNLKRAREDSNNNSKHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALSIKGSSAILNFPELAASLPRPASKSPRDVQSAAAKAASMEILNINPAPTTSSSLPALSSCSGDVSTPEELGEIVELPSLGTSFQEPDPNNDFVFFDLVEGWSYPHPWYNNLYDDENKYCGGYFTTSMQEEETEGLILCGFDGSLWQH	254

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele45g0668	254	MobiDBLite	consensus disorder prediction	1	61	-	-
	Lele45g0668	254	MobiDBLite	consensus disorder prediction	1	45	-	-
	Lele45g0668	254	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	36	190	-	-
	Lele45g0668	254	FunFam	Ethylene-responsive transcription factor 2	61	120	-	-
	Lele45g0668	254	Gene3D	AP2/ERF domain	62	120	IPR036955	GO:0003700\|GO:0006355
	Lele45g0668	254	SUPERFAMILY	DNA-binding domain	62	120	IPR016177	GO:0003677
	Lele45g0668	254	PRINTS	Ethylene responsive element binding protein signature	63	74	IPR001471	GO:0003700\|GO:0006355
	Lele45g0668	254	PRINTS	Ethylene responsive element binding protein signature	85	101	IPR001471	GO:0003700\|GO:0006355
	Lele45g0668	254	Pfam	AP2 domain	61	111	IPR001471	GO:0003700\|GO:0006355
	Lele45g0668	254	SMART	rav1_2	62	125	IPR001471	GO:0003700\|GO:0006355
	Lele45g0668	254	CDD	AP2	63	121	IPR001471	GO:0003700\|GO:0006355
	Lele45g0668	254	ProSiteProfiles	AP2/ERF domain profile.	62	119	IPR001471	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele45g0668	Lele-ChrLele45	5656381	5657145	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele45g0668	27	214	AP2-EREBP Transcription Factor Family	AT5G11590	57.071	5.72e-63	195

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Lele45g0668		AP2	8.9e-14	CL0081