Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0658 ATGTCTGTTCCTGAGCAAGACTATGTAAGCTTATCAGAGACTTTAACTCCATCAATGGAAAGCTCAGACAAGTTCTCTCAGAGAAGAAACGGTTTGAATCTCAAGGCAACTGAACTACGGCTCGGGTTACCCGGGTCGGAGTTGCCCGAGATGGATTCGGATTCGGAGGATAAGAATGAGTATCCATTAGGCATACTCAAGAGTCTCGTGTCTGGGGCCAAGAGGGGCTTCTCAGGCGCCATTGATGGCGGTTCTGGGAAGTGGTTTCTCTCCGGCAAAGCTGGTTCTGATATGGGTTTGGGTAATGATTGTAGCTTGTTCTCTCCTAGAGGTGCTAACTCTGGCAAGACCCCTGTCGGGTCGGATTCCGGCAACCATCAAGCGGGTTTGGGTCCCTCCGCTGTGAAAGATAGTATTCCTCAGCCAACAAAGCCTTTGCATGAGAAGAAGTCTCAGTTTCCTGCTCCTGCTTCAAAGGGACAAGTTGTGGGATGGCCACCAATCCGATCATTTCGGAAGAACTCAATGGCTCCTCAGCCTCAAAAGAATGGTGATGATGCAGAATCAGGTGGCAAGAGTGGATGTCTTTATGTAAAAGTGAGCATGGACGGTGCTCCATACTTGAGGAAGGTAGATCTCAACAACTTTGCCTCTTACATGCAACTTTCTTCTGCTCTGGAAAAGATGTTCAGTGGCTTCACAATGAGTCAATGCGGCTCTCATGGGGTTTCGTGTCGGCATAATATGAGTGAGAGTAGATTGATGGATCTGCTTAATGGTTCAGAATATGTGCTCACTTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCTTGGGAGATGTTCACTGATTCTTGCAAGAGGATGAGGATAATGAAGAGTTCTGAAGCCATTGGGTTAGCGCCGAGAGCGATGGAGAAGTGCAAAGGTCAATCAGATTGA 951 0.4753 MSVPEQDYVSLSETLTPSMESSDKFSQRRNGLNLKATELRLGLPGSELPEMDSDSEDKNEYPLGILKSLVSGAKRGFSGAIDGGSGKWFLSGKAGSDMGLGNDCSLFSPRGANSGKTPVGSDSGNHQAGLGPSAVKDSIPQPTKPLHEKKSQFPAPASKGQVVGWPPIRSFRKNSMAPQPQKNGDDAESGGKSGCLYVKVSMDGAPYLRKVDLNNFASYMQLSSALEKMFSGFTMSQCGSHGVSCRHNMSESRLMDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRMRIMKSSEAIGLAPRAMEKCKGQSD 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0658 316 MobiDBLite consensus disorder prediction 109 128 - -
Lele45g0658 316 Gene3D - 190 308 - -
Lele45g0658 316 FunFam Auxin-responsive protein 190 307 - -
Lele45g0658 316 Pfam AUX/IAA family 37 306 IPR033389 -
Lele45g0658 316 MobiDBLite consensus disorder prediction 109 190 - -
Lele45g0658 316 ProSiteProfiles PB1 domain profile. 195 297 IPR000270 GO:0005515
Lele45g0658 316 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 32 302 IPR003311 GO:0005634|GO:0006355
Lele45g0658 316 MobiDBLite consensus disorder prediction 1 31 - -
Lele45g0658 316 SUPERFAMILY CAD & PB1 domains 192 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0658 Lele-ChrLele45 5549691 5552676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0658 197 300 B3 DNA Binding Superfamily AT1G19220 30.769 6.51e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele45g0658 AUX_IAA 8.2e-85 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0658 45 5549691 5552676 Lele47g0734 47 13561690 13564721 hybridization
Lele45g0658 45 5549691 5552676 Lele48g0775 48 13095252 13098114 hybridization