Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0655 ATGAATAGAGGCGTTGTTCAGAGCTCGCCGGTGCAACAAATGATGGCCGCCGGCAACCCTAATTGGTGGAACATAAATCATACGATGAGGCCTCCTATTTCTCATCATCATCAACAACAACCACCACCTAATTCTAATTCTTCTTCTTCTCCTTTCTTCTTCTCATCATCATCAACTAACTTCCTCTCTCCTAATTATCCCCCATCTTCTTCTTCTCTGCCTTTTCCTTCTACCTGGCATGGAATTCCAGATCACCTTCCTCAGTCCTGGAGCCAACTTCTCTTGGGTGAAGAAGATAAGAAAATGGGGAACTGGGAGGAGCAAGTGCTGATGAGTCAGGCTCAAAATGTTGGTCTTGTGGATGTCAAGCAAGAGACCTCATCGGTGAACAGTTACGTGTATGGAGGAGGACATGGCGGTGGTGGTGCTGGTGGCGGCAATAATAGTAGCGAAGAGTTTCAGGAGGCTTCCACCGGTGGTGGTTGTGCTGCTGCTAATTGGTCTCATCAAATAGTGCCTCCTCCTCGTCCTCGTCCTCCTGCTACTGCTTCATCTTCTTCACCAAAATCATGTGTCACAAGTTTCAGCAGCAACATGTTGGATTTCTCTAGCTCTAAGAAAGATGCTAGGCATCCTCCTCCAGATAGATCTTCTGAGTGTAACAGCAATGGAGGTGGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCATCAACGACGACACAGACTCAGTCAAGCTTCAAGGTTAGAAAGGAGAAATTGGGTGACAGAATTACTGCCCTTCATCAGCTTGTTTCCCCCTTTGGAAAGACTGATACAGCGTCTGTCTTGTTAGAAGCTATAGGATATATCAGATTCCTCCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGGGCACTTCTTCTGGATCATCTTCTTCAAACAAGAGGCACCAACACTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACTCTGGTCAGGAATTAGAGGAAGAACCAAAGAAGGATCTGAAGAGTAGAGGGTTGTGTTTGGTTCCAGCTTCATGCACACTTCAAGTTGGGAGTGATAATGGAGCTGATTACTGGGCTCCTGCTCTTGGAGGAGGAGGCTTTCAATAA 1128 0.4637 MNRGVVQSSPVQQMMAAGNPNWWNINHTMRPPISHHHQQQPPPNSNSSSSPFFFSSSSTNFLSPNYPPSSSSLPFPSTWHGIPDHLPQSWSQLLLGEEDKKMGNWEEQVLMSQAQNVGLVDVKQETSSVNSYVYGGGHGGGGAGGGNNSSEEFQEASTGGGCAAANWSHQIVPPPRPRPPATASSSSPKSCVTSFSSNMLDFSSSKKDARHPPPDRSSECNSNGGGGGAVKKARVQPSTTTQTQSSFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGTSSGSSSSNKRHQHSVQGEKNCIFPEDSGQELEEEPKKDLKSRGLCLVPASCTLQVGSDNGADYWAPALGGGGFQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0655 375 MobiDBLite consensus disorder prediction 183 203 - -
Lele45g0655 375 Gene3D - 246 297 IPR036638 GO:0046983
Lele45g0655 375 CDD bHLH_AtbHLH_like 246 295 IPR045239 -
Lele45g0655 375 FunFam transcription factor bHLH68 isoform X1 245 298 - -
Lele45g0655 375 MobiDBLite consensus disorder prediction 140 248 - -
Lele45g0655 375 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 38 356 - -
Lele45g0655 375 MobiDBLite consensus disorder prediction 301 336 - -
Lele45g0655 375 MobiDBLite consensus disorder prediction 147 164 - -
Lele45g0655 375 MobiDBLite consensus disorder prediction 22 51 - -
Lele45g0655 375 MobiDBLite consensus disorder prediction 234 248 - -
Lele45g0655 375 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 238 287 IPR011598 GO:0046983
Lele45g0655 375 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 248 299 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0655 Lele-ChrLele45 5491298 5495405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0655 1 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 40.153 1.13e-67 216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0655 45 5491298 5495405 Lele47g0737 47 13641494 13646066 hybridization
Lele45g0655 45 5491298 5495405 Lele48g0777 48 13134665 13138399 hybridization