Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0645 ATGTACAGATCCTTCATGACATGTGATGATCCAAAAGGAGTCGTGGAATGCGGGGCAATCAGAAAGTCCAGGGCTGGATCACAGAAGATGAAGGACAAGATGAAAAGTCACCGGAGGACAACGGCTGAGAAATCTGAAGCGTCTTTGTCAAAAAGATCAGATAGAGAAGAAATGGTCCCAAAAGGATCCACACAAAGTTCTGTCGATCCATGTTCCTTGCAGCTTATGGAGGTCTCAACAGGGGCTCAAAGGTTGAACACCATGATTGATACATGGTCTAGGGATATGAGATATGATGGAAGGTCTGGAGATATTGCAAAAGATTTGTTGAAAGGAGCTCTTGATCTCCAAGAATCTCTAGTCTTGCTTCGAAAGTTGCAAGAAGCTTCGCAGCACAAGTCCTGTTTGAAGAAAAACCAGAATGAGAAACCTGAAAGAGGAAGAATTGATGCAAAGATGATGTGTGGAACATTCACTAACAACCAATTTAGTGAACAAAGTTATCCAATGGGATTTGAAAGACCTCGCCCTTCTGCTGATGGTTCTTCAAGAAATTGCACAGAGGATCTTAAGAAAGTGATCAAAGACAGCCTGATTAAGCAAAATCTGTTTACTATGCCAAGTTCTGAAGGATTAGATTCAGCATCTGAAATTCCCTCAACAAGCTCAAGCCAATCTTCTGGGGTTCATACTGATAGGCTTTCTGATTCATCTTTTTCATCTGGCACTTCAAAGGTGAGAGGAACCAATCTAATTGCAAAGCTAATGGGTTTAGAAGAATCCCCCTCAAGACCATTTCCAGCTGCTGCACATAAACAGTTGCAGGGTGAAAAGATTCTGAATCAAAAGAGACCTACATTTGAGATAGATATCCCCAAGTTGAAAAAGACTAGTTCTATAATTGAGAAGGTTGATCCGGAACGAAAGAAGACCCTGAGTGAAATTCTTGAGACTATTCATTTCAAAGGACTATTGAAGAAGAGTTCTATCCTTGAGCCTAATCTTCGGATTCGTCATTCTGATGATTCCCATCCCAAACAATGTAATAATTTACCGCCGATTGTACTCATGAAACCTCGATATAGTTCATGCCAGGAATCAGCTAAATCCCATGCATTTGTTCCTCCAGATCCAGAAGGTCTATCGCTTAGAACACCAAAAGCAGAGGTAGTACCTTCCAAATCATTCAAACAAAAAGGATCCACCAGCATGGGGAGCAGAGCAGAAGATGTGACCAAAATGCTTACACGTGAGGAGAAGCCTAAAATCCTCAAAGAGTTCGTGAAGCTGGATGAGAAAGCAATCATGCCTATTGAAAAGTCTCCAAATATGGTGAAATCATACAGTCATATAAGTCATAAACCACACGTACAGGAAGCAATTGAGAAAAAAGCTAAGGTGAAAACTGTTACCAGAAAGCTGCCAGAAAAAAAGGAGGTCTCGAGACATAAAATTTTGACAAGGTCCCAAGATCGAGGAGAAATTACCTCCACAAAGATGAGGACACCAACAAGTGAATTGACCATAATCAAGAATGAGATTCCCTCCCAGCAGAGCACAGCTTTGATCATCAGCCCAAAAACAAAAACAACAAAGCATATGAATTTCAAACCGAGAAAGAATCAGAATAATAGCCAGAAGCTTATTCCAGAGCCTGAAGCAGCTAAACCAATTGATGAACAATCAGTAAGCGAAGAAGAGAAGAGTATTGTTGTTCCTTGTGAAGATGATTGCACTGAGATTAGGACTATAGCTGAACATGCAGTTGAATTTCCAGTGGAACATGAAGTAGATGCCTCCACGAGTAAGATAGATGAAGATTGTTATCAGAGCCCGAACTCTTCAGGTGATGTTACACCGCTAAAGGTTGAACACGAAATTGATGCCACTTCTGCTGAAGAAGCTCATGATGTGAACAATGGTGGGGAGACAGATAGCAAGACTAACCATGAAGGGGCTGAGCTGAAATATTTTCTTTTAACCAACCCATTATTTGTTGGCCATGCAGAGGAGCTCCTGAATCTTGATGTGGATTGTCTCATGACCCTGCAAAAATATGAAACCAATGGGATAGCGAATCCCAGGCTCTATTTGGATTGTGCAAATGAACTCACTGAGCGTAAAAGCCTGCAATATTCACAAATGGTTCATCCAATCTTGCTAACTCGGGCAGGGAACTCGAGATTACTGATCTCTTTAGGCAGGTTGGTTGAAGAAATCTACAATGCCATTGAGAAGCTGAAGTTTTACACTATGATCTCCGGGGAGAAATTCTCTGTAGATAATCTCTATGCAATGATGAGAAGTGATATAAAGTGCTATGCGCTGATAAATGGAATATGGGACTGGGGTTGGAGGTATGGATTTTCTGCAGATGAATCTGAGCAAGTTGTCAACGAGGTAGAGAGCCTAGTTTTAAGTGGGTTGATTGAGGAGCTTATTGTAGATTTATGA 2454 0.4116 MYRSFMTCDDPKGVVECGAIRKSRAGSQKMKDKMKSHRRTTAEKSEASLSKRSDREEMVPKGSTQSSVDPCSLQLMEVSTGAQRLNTMIDTWSRDMRYDGRSGDIAKDLLKGALDLQESLVLLRKLQEASQHKSCLKKNQNEKPERGRIDAKMMCGTFTNNQFSEQSYPMGFERPRPSADGSSRNCTEDLKKVIKDSLIKQNLFTMPSSEGLDSASEIPSTSSSQSSGVHTDRLSDSSFSSGTSKVRGTNLIAKLMGLEESPSRPFPAAAHKQLQGEKILNQKRPTFEIDIPKLKKTSSIIEKVDPERKKTLSEILETIHFKGLLKKSSILEPNLRIRHSDDSHPKQCNNLPPIVLMKPRYSSCQESAKSHAFVPPDPEGLSLRTPKAEVVPSKSFKQKGSTSMGSRAEDVTKMLTREEKPKILKEFVKLDEKAIMPIEKSPNMVKSYSHISHKPHVQEAIEKKAKVKTVTRKLPEKKEVSRHKILTRSQDRGEITSTKMRTPTSELTIIKNEIPSQQSTALIISPKTKTTKHMNFKPRKNQNNSQKLIPEPEAAKPIDEQSVSEEEKSIVVPCEDDCTEIRTIAEHAVEFPVEHEVDASTSKIDEDCYQSPNSSGDVTPLKVEHEIDATSAEEAHDVNNGGETDSKTNHEGAELKYFLLTNPLFVGHAEELLNLDVDCLMTLQKYETNGIANPRLYLDCANELTERKSLQYSQMVHPILLTRAGNSRLLISLGRLVEEIYNAIEKLKFYTMISGEKFSVDNLYAMMRSDIKCYALINGIWDWGWRYGFSADESEQVVNEVESLVLSGLIEELIVDL 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0645 817 MobiDBLite consensus disorder prediction 25 59 - -
Lele45g0645 817 MobiDBLite consensus disorder prediction 209 244 - -
Lele45g0645 817 MobiDBLite consensus disorder prediction 21 69 - -
Lele45g0645 817 MobiDBLite consensus disorder prediction 528 549 - -
Lele45g0645 817 PANTHER OS01G0228800 PROTEIN-RELATED 1 817 - -
Lele45g0645 817 MobiDBLite consensus disorder prediction 528 570 - -
Lele45g0645 817 MobiDBLite consensus disorder prediction 370 408 - -
Lele45g0645 817 MobiDBLite consensus disorder prediction 166 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0645 Lele-ChrLele45 5379464 5382289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0645 655 814 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 30.952 9.97e-18 86.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0645 45 5379464 5382289 Lele47g0747 47 13799178 13802013 hybridization
Lele45g0645 45 5379464 5382289 Lele48g0790 48 13242063 13246999 hybridization