Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0640 ATGCGATCCCTCAATATCCTTCCTCCATTGCCGTCGCTGCAAAACCCTACCTCCGATCACATTCACTTCTTCAAACCCATTAGTTCCTTCAATTTCCGCCCAAGTTCCAAAACCCTAACTAACGGTTTTTTCTACAGAGTCCAAAGCGGTGGACTCCACTGCCGGAAGATTAACTGCAATGCTTTGAAGGATTCCGGCGAAGAAACTAAGGTTTTATTGGACTCCAGTGATGGCGATGATGGCGGAGGGAGTGGTGGTAACGGTGGCGATGGTGGTGAGGATAGTAAGGAGGTGCAGAAAAAAGATGGGTCTTCTGCGGGACCTTTGCCGGATTGGTTGAATTTCACTTCTGATGACGCAAAGACCGTCTTTGCGGCACTTGCAATCTCGCTTGCGTTTCGGTCGTTTGTGGCCGAGCCTAGGTACATTCCTTCCTTGTCAATGTATCCTACGCTTGATGTTGGAGATCGAATTGTTGCAGAGAAGGTTTCATACTATTTTAGAAAGCCTTGCACAAATGACGTAGTAATATTTAAGAGCCCACCAATCCTTCAGGAAGTTGGGTATACTGATGATGATGTCTTTATAAAACGAGTGGTTGCAAAAGAAGGTGAGATTGTGGAGGTTCATAAAGGGCGTCTTATAGTTAATGGGGTTGAAAGGAATGAGAAGTTCATCCTTGAACCACCTTCTTATGACATGACACCTACACGTGTGCCAGAGAATTACGTTTTTGTAATGGGAGACAATCGTAACAACAGCTATGATTCCCATGTGTGGGGCCCTCTGCCAACCAAGAGCATAATAGGAAGATCAGTTTTTCGGTATTGGCCACCAAATAGGATTGGCAGCACAATTCCTGAGAAGAGTTGTCCTCTTGAAAGTGATCAGGGAACCAGTCTAGCTTCTCAATAA 915 0.4536 MRSLNILPPLPSLQNPTSDHIHFFKPISSFNFRPSSKTLTNGFFYRVQSGGLHCRKINCNALKDSGEETKVLLDSSDGDDGGGSGGNGGDGGEDSKEVQKKDGSSAGPLPDWLNFTSDDAKTVFAALAISLAFRSFVAEPRYIPSLSMYPTLDVGDRIVAEKVSYYFRKPCTNDVVIFKSPPILQEVGYTDDDVFIKRVVAKEGEIVEVHKGRLIVNGVERNEKFILEPPSYDMTPTRVPENYVFVMGDNRNNSYDSHVWGPLPTKSIIGRSVFRYWPPNRIGSTIPEKSCPLESDQGTSLASQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0640 304 PRINTS Bacterial leader peptidase 1 (S26A) family signature 239 258 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele45g0640 304 PRINTS Bacterial leader peptidase 1 (S26A) family signature 195 207 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele45g0640 304 PRINTS Bacterial leader peptidase 1 (S26A) family signature 136 152 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele45g0640 304 TIGRFAM sigpep_I_bact: signal peptidase I 121 279 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele45g0640 304 Gene3D Umud Fragment, subunit A 133 290 - -
Lele45g0640 304 ProSitePatterns Signal peptidases I signature 3. 244 257 IPR019758 GO:0004252|GO:0016020
Lele45g0640 304 ProSitePatterns Signal peptidases I serine active site. 145 152 IPR019756 GO:0004252|GO:0016020
Lele45g0640 304 SUPERFAMILY LexA/Signal peptidase 134 285 IPR036286 -
Lele45g0640 304 MobiDBLite consensus disorder prediction 71 107 - -
Lele45g0640 304 FunFam Peptidase/ serine-type peptidase 145 276 - -
Lele45g0640 304 Pfam Signal peptidase, peptidase S26 120 277 IPR019533 GO:0004252|GO:0006465
Lele45g0640 304 CDD S26_SPase_I 139 271 IPR019533 GO:0004252|GO:0006465
Lele45g0640 304 PANTHER SIGNAL PEPTIDASE I 108 283 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0640 Lele-ChrLele45 5337219 5344840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0640 148 278 MADS-box Gene Family AT1G29960 31.579 1.06e-11 59.3