Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0639 ATGTCAGCGACGCCGTCACCCGGAGCTGCTCCAGCACCCACGTCGCCGCCGGCTCCGGCGACCAACAATACTTCTCCTCCGCCCAGCCCTTCAGCTCCTCCGCCGTCCACCCCGGCCTCACCGCCGCCAGCTACACCCTCTGCTCCACCACCGGCGACTCCTTCGACTCCTCCTCCTGCCCCAGCTACACCTTCTCTGAGCCCTCCTTCTACTTCCCCTCCGTCCCCTCCATCAACCTCACCACCACCGGAATCTTCAGCATCGCCTCCTCCACCGTCCAGTACCAACACTCCACCGAGTCCTCCGAGTCGCAGCTCGCCGACTCCTCCGTCGAGTTCAAATACGCCTTCGACTCCGAATCGAAGTCCACAGACACCGTCGTCAAAATCGTCGCCGTCTCCATCTTCGTCATCGTCCTCATCGAGTAATATATCAACTGGGGTTGTTGTGGCCATTGCCGTTGGGGCTGTGGCGGTTCTTGTTGTGTTGAGTATTCTCTGCATTTGCTGTAGGAAGAAAAAGAGAAGACGTGATGAGGAATACTATGTGCCGCCGCCGCCGCCGCCTCAGGGACCCAAAGTTGATCCATATGGTGGCCCACAGCATCAATGGCAGCACAATGCTCCCCCTCCTTCAGATCATGTGGTTTCAGTAATGCCAAAGCCATCGCCCCCTCCACCACCAGTTGCATCACGGCCTGCCCACTCACCAATTTATGCTCAACCTCCACCGCCACCGCCACCTTTCATAAGCAGCAGTGGTGGGTCTGGCTCTAACTTTTCAGGGGGTGAAAACATTCTTCCACCTCCCTCCCCTGGCTTTGCACTGGGTTTCTCAAAGAGTACATTTACATATGAGGAGCTGGCCCGGGCAACAGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGGTATGTGCACAGAGGCATTCTTCCGAACGGAAAGGAAGTGGCTGTGAAGCAGCTTAAGGCTGGAAGTGGGCAGGGGGAGCGCGAGTTTCAAGCTGAAGTTGAGATCATTAGTCGGGTTCATCACAAGCATCTTGTTTCTTTGGTTGGATACTGCATTACTGGGACACAGAGGTTGCTCGTTTATGAATTTGTTCCCAACAATACGTTGGAGTTTCACTTGCATGGAAAAGGGAGGCCTACCATGGACTGGCCCACGAGACTAAAAATCGCTTTAGGATCAGCAAAAGGCTTGGCGTATCTTCATGAGGACTGTCATCCTAAGATCATCCACCGTGATATCAAAGCCGCTAACATACTCCTGGATTTTAAATTTGAAGCCAAGGTGGCAGATTTTGGACTTGCAAAGTTTACATCTGATGTTAATACTCATGTTTCCACTCGAGTGATGGGGACATTTGGTTATCTGGCTCCAGAATATGCTTCTAGTGGGAAACTCACAGACAAATCAGATGTTTTCTCCTTCGGAGTCATGCTTCTGGAATTAATTACTGGACGCCGACCAGTTGATTCAAGCCATACATTTATGGAGGATAGTTTGGTAGATTGGGCAAGGCCTACGTTCACTCGTGCATTGGAAGATGAAAATTTTGATTCCGTGGTTGATCCAAGACTCCAACATGAATATGACCCCCATGAGATGGCTCGTATGGTGGCATGCACTGCAGCTTGCATACGTCATTCGGCAAAGCGCAGGCCAAGGATGAGCCAGGTTGTTCGCGCTCTAGAAGGAGATGTGTCTCTTGCAGACCTTAATGAAGGAATTAAACCCGGCCATAGCTCTGTCTACAGTTCTCATGGAAGTTCAGATTATGACACAGTTCAATACAAGGAAGACATGAAAAAGTTCAGGAAAATGGCATTTGGAGGAGGAACCAACGAGTATGGTGCGAGTAGCGAATACAGCGGACCGCCTACAAGTGAGTATGGCTTGTACCCGTCTGGCTCAAGCAGTGAAGGCCAGAGTCGCCAGACCACAAGGGAAATGGAAATGAGAAAGATGAACAGCCAAGGTTTCATTGGAAGTTCATAA 2010 0.5139 MSATPSPGAAPAPTSPPAPATNNTSPPPSPSAPPPSTPASPPPATPSAPPPATPSTPPPAPATPSLSPPSTSPPSPPSTSPPPESSASPPPPSSTNTPPSPPSRSSPTPPSSSNTPSTPNRSPQTPSSKSSPSPSSSSSSSSNISTGVVVAIAVGAVAVLVVLSILCICCRKKKRRRDEEYYVPPPPPPQGPKVDPYGGPQHQWQHNAPPPSDHVVSVMPKPSPPPPPVASRPAHSPIYAQPPPPPPPFISSSGGSGSNFSGGENILPPPSPGFALGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDSSHTFMEDSLVDWARPTFTRALEDENFDSVVDPRLQHEYDPHEMARMVACTAACIRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSSVYSSHGSSDYDTVQYKEDMKKFRKMAFGGGTNEYGASSEYSGPPTSEYGLYPSGSSSEGQSRQTTREMEMRKMNSQGFIGSS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0639 669 FunFam Proline-rich receptor-like protein kinase PERK1 371 579 - -
Lele45g0639 669 FunFam proline-rich receptor-like protein kinase PERK1 273 370 - -
Lele45g0639 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Lele45g0639 669 Gene3D Transferase(Phosphotransferase) domain 1 371 578 - -
Lele45g0639 669 CDD STKc_IRAK 301 570 - -
Lele45g0639 669 MobiDBLite consensus disorder prediction 621 669 - -
Lele45g0639 669 MobiDBLite consensus disorder prediction 1 144 - -
Lele45g0639 669 Pfam Protein tyrosine and serine/threonine kinase 300 568 IPR001245 GO:0004672|GO:0006468
Lele45g0639 669 ProSiteProfiles Protein kinase domain profile. 295 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0639 669 MobiDBLite consensus disorder prediction 117 144 - -
Lele45g0639 669 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Lele45g0639 669 MobiDBLite consensus disorder prediction 215 251 - -
Lele45g0639 669 MobiDBLite consensus disorder prediction 9 116 - -
Lele45g0639 669 MobiDBLite consensus disorder prediction 177 266 - -
Lele45g0639 669 Gene3D Phosphorylase Kinase; domain 1 275 370 - -
Lele45g0639 669 SMART serkin_6 295 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0639 669 MobiDBLite consensus disorder prediction 621 650 - -
Lele45g0639 669 PRINTS Proline rich extensin signature 38 55 - -
Lele45g0639 669 PRINTS Proline rich extensin signature 1 19 - -
Lele45g0639 669 PRINTS Proline rich extensin signature 19 35 - -
Lele45g0639 669 PRINTS Proline rich extensin signature 57 82 - -
Lele45g0639 669 SUPERFAMILY Protein kinase-like (PK-like) 275 568 IPR011009 -
Lele45g0639 669 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 154 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0639 Lele-ChrLele45 5311116 5314415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0639 117 653 Trihelix Transcription Factor Family AT1G70460 49.353 1.83e-166 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele45g0639 PK_Tyr_Ser-Thr 1.2e-47 CL0016