Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0630 ATGGAGCAGAACGACGTGGTTCCACCGTTCGTTATAAAGACTTTTCATATGGTGAGCGATCCTAGCACCGATGCTCTTATCATTTGGGGGCGAGCTAACAATAGCTTCATTGTCTTCGATCCTTTGGATTTCTCTCGGATGATTCTACCTGCATATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGTCAGTTAAACACCTACGGGTTTAGAAAGGTGGATCCAGATCGATGGGAATTCGCGAACGAGTGGTTTCTTCGGGGGCAGAAGCACTTGTTGAAGAATATTGTGAGGAGGAAACAAAGTAGGAGTAGTAGCTATTTGTCGTTGTTTCAGGGGAAGAATAATGAGGAGGTGGAAGACGAAGTGTTGATGATGGAGATTGCGAGGTTGAAGGAAGAGCAGAAATCTTTGGATGAAGAACTTCAAGGGATGAATAAGAGATTGGAGACCACAGAGAAACGACCTCAGCAAATGATGGCGTTTCTGTACAAAGTTGTCGAGGACCCAGACGTCCTTTCTCGGATTTTGTTGGAGAAAAAGCAGAAGCAATTGGGAGAGAAGAAGCGGCGGTTGATATCATCGTCGCCGTCGTCTTCGTCTGGTATGGCGACGGTGAAGACGGAGTTTGAGGAAGAGGAAGCTGCTGCTTTGGGTGGTGCGATAATATCTTCGCCGTCGTCGGAAACGACTACAATTGGTTTTGAGTTCGGTCGATATAGTCAGGCATCGCCGCCGCCGAGGGAGGAAACAATAATCTCCGGCGCCGTTACGAGTTCGGGTTGGTGGAGCGAGAGAAATGATGCTATAATGGTAAGGCCTCGGATAAATCAACAAGCTTATAATAATAATTATTACAACGGGTGGTCATCAAGCCCGTTGACGGCGGTTGTGGCGGCGAGAATGGATGAGAAAGGGTCGGCGATGATGTCGATGTCGGCGCGTGAGGGAGAAAGCAATTCGGCTAGAGAGGAGCAAAGGAGCTATTTTACAGAAATGGCGGCGGAGAACAGGCCACGGCCACCTTATCCATTTTCGCTGTTGGAAGGTGGCTTCTAG 1059 0.4825 MEQNDVVPPFVIKTFHMVSDPSTDALIIWGRANNSFIVFDPLDFSRMILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLKNIVRRKQSRSSSYLSLFQGKNNEEVEDEVLMMEIARLKEEQKSLDEELQGMNKRLETTEKRPQQMMAFLYKVVEDPDVLSRILLEKKQKQLGEKKRRLISSSPSSSSGMATVKTEFEEEEAAALGGAIISSPSSETTTIGFEFGRYSQASPPPREETIISGAVTSSGWWSERNDAIMVRPRINQQAYNNNYYNGWSSSPLTAVVAARMDEKGSAMMSMSAREGESNSAREEQRSYFTEMAAENRPRPPYPFSLLEGGF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0630 352 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele45g0630 352 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele45g0630 352 FunFam Heat shock transcription factor 1 3 100 - -
Lele45g0630 352 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele45g0630 352 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele45g0630 352 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele45g0630 352 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 227 IPR027725 -
Lele45g0630 352 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Lele45g0630 352 Coils Coil 114 155 - -
Lele45g0630 352 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele45g0630 352 Gene3D - 2 100 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0630 Lele-ChrLele45 5217054 5218236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0630 6 200 HSF AT3G24520 64.322 1.06e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele45g0630 HSF_DNA-bind 1.1e-29 CL0123