Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0629 ATGAGCGTGATGGGGAGGCAGATGCCGCGATCTAATTCCACAGTGCATCATCATCGTCAGAATTCTGATAACTTTCTTGAGACAACTTCGCGGGGAAGGTGGTTTCAGTCGTCTACTTCAACGCAGGAGTTTGGGTCTTATGTGGGAGGACTTCAGGGGTTTGGTGGGTATCGGTCTTCCAGCTTGAGGAAGAATGATGACGATCAAGTCTTTCTCGGTGGGCTTACCCATGGCCTTCTTGATCTGCATTCCTTCAATACTGAGCTTTTGCCTGAGATGTCTGGTTTTCACGATGAATATTTAACCAATCATCCAGTTCGTGGTAGAAGTTTTGATGATTCCGAGCCATTTTCTTCCATAACTGGAAACAAAGCTCGGGGCTTGCCTGAGACCAGTCTTAAAAGTCTCTCAACAGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTTGTGGTTCGTAAGAGACCACTAAATAAGAAAGAAATATCAAAGAAAGAGGAAGATATAATCACCATAGATTCCAATGCTCTCACTGTTCATGAAAGGAAACTTAAGGTTGACTTAACAGAATATGTTGAGAAGCATGAATTTGTTTTTGATGCTGTACTGAATGAAGATGTTTCAAATGATAAAGTGTATTCTGAGACAGTGGAACCTATTGTCCCTCTTATTTTCCAACGAACAAAAGCTACTTGCTTTGCATATGGCCAAACAGGAAGCGGGAAGACTTATACCATGCAACCGCTGCCTCTCAAAGCATCCCAAGATATTTTAAAATTGATGTACTATACATACAGGAACCAAGGCTTCCAATTGTTTGTTAGTTTCTTCGAGATATATGGGGGGAAAGTATTTGATCTCCTCAATGATCGAAAAAAACTTTTCATGAGGGAGGATGGGAAACAACAGGTTTGCATTGTGGGCTTGCAAGAATACAGAGTATCTGATGTTGAGGCAATCAGGGAATTTATTGAGAAAGGGAATGCTACAAGAAGTATTGGTACAACTGGTGCAAACGAGGAATCCTCTCGATCACATGCCATACTTCAGCTTTGTATCAAGAGATCAGTCGATGGAACTGAATCAAAGCCTGCTCGACTTGTTGGCAAGTTATCTTTTATTGATCTTGCTGGAAGTGAACGTGGTGCAGATACTACAGATAATGATAAACAGACAAGGATTGAAGGTGCAGAAATTAATAAAAGCTTACTTGCTTTAAAGGAATGCATTAGAGCTCTTGACAATGACCAGGGACATATTCCTTTCAGAGGAAGTAAATTGACAGAAGTCTTAAGAGATTCTTTTGTTGGTGACTCAAGCACTGTAATGATATCATGCATTTCACCGAGCTCCGGTTCATGTGAACATACTCTAAACACTTTAAGATATGCTGACAGGGTGAAGGGTTTGTCAAAAGGGAATAACTTCAAAAAGGATCCCGTTTCTTCATCTTCGAACGGGAGAGACTCCACAACATTGCCTTCGTCCTCAGTTTTATCTCGTGAGGATACATTTGAAGATGAGATAAATTACGTTTCTACAGACAAGAATCGTTTTGGTTGGTCCAAACAACTTGAAAGAGAGCCCTCTCCTCCTATTAACATGGATCGTGTTCCTAGTGGAAGGATGGGGGGAAATTTTGCCGCATCTGTGTATTCAGACACACAAAGGGGTCAAAGAGGTGGTCAAAATGACGAAGCTGAAAATGAAGTTGATTACGTTAAGCCAACATATGAACAAGACAGAACGAGAAAGACAAGTAATAAGGTAGACACCACCCGATTAGCTTCTGTGGAGGACAAGAAGATAGAGTCTCATGTGAAACGTATGGATCAGTCAAAGGCTAATAATAAGAATAACCCTGATGATGATCTAAATGCCCTGTTAAAGGAAGAGGAAAATCTCGTAGCAGCTCATAGGAGACAAGTGGAGGACACAATGGACCTTGTTAGAGAGGAGATGAATCTGCTTGTTGAGGCTGACGAACCAGGAAACCAACTAGATGATTATATTGTCAAATTAAATTCAATTTTGTCACGGAAAGCAGCTGGAATTCTTCAACTGCAGACCCAGTTGGCTCAATTCCAAAGACATTTGAAGGAATACAATGTTCTGGAGTCCTCTGATAACTGA 2136 0.4092 MSVMGRQMPRSNSTVHHHRQNSDNFLETTSRGRWFQSSTSTQEFGSYVGGLQGFGGYRSSSLRKNDDDQVFLGGLTHGLLDLHSFNTELLPEMSGFHDEYLTNHPVRGRSFDDSEPFSSITGNKARGLPETSLKSLSTDKERANNVAKIKVVVRKRPLNKKEISKKEEDIITIDSNALTVHERKLKVDLTEYVEKHEFVFDAVLNEDVSNDKVYSETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILKLMYYTYRNQGFQLFVSFFEIYGGKVFDLLNDRKKLFMREDGKQQVCIVGLQEYRVSDVEAIREFIEKGNATRSIGTTGANEESSRSHAILQLCIKRSVDGTESKPARLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSSTVMISCISPSSGSCEHTLNTLRYADRVKGLSKGNNFKKDPVSSSSNGRDSTTLPSSSVLSREDTFEDEINYVSTDKNRFGWSKQLEREPSPPINMDRVPSGRMGGNFAASVYSDTQRGQRGGQNDEAENEVDYVKPTYEQDRTRKTSNKVDTTRLASVEDKKIESHVKRMDQSKANNKNNPDDDLNALLKEEENLVAAHRRQVEDTMDLVREEMNLLVEADEPGNQLDDYIVKLNSILSRKAAGILQLQTQLAQFQRHLKEYNVLESSDN 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0629 711 Coils Coil 686 706 - -
Lele45g0629 711 PRINTS Kinesin heavy chain signature 421 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0629 711 PRINTS Kinesin heavy chain signature 371 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0629 711 PRINTS Kinesin heavy chain signature 228 249 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0629 711 PRINTS Kinesin heavy chain signature 337 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0629 711 ProSiteProfiles Kinesin motor domain profile. 148 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0629 711 Gene3D Kinesin motor domain 128 473 IPR036961 -
Lele45g0629 711 CDD KISc_KIF2_like 148 469 - -
Lele45g0629 711 MobiDBLite consensus disorder prediction 473 501 - -
Lele45g0629 711 MobiDBLite consensus disorder prediction 1 15 - -
Lele45g0629 711 SMART kinesin_4 146 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0629 711 MobiDBLite consensus disorder prediction 606 625 - -
Lele45g0629 711 MobiDBLite consensus disorder prediction 1 29 - -
Lele45g0629 711 MobiDBLite consensus disorder prediction 477 501 - -
Lele45g0629 711 ProSitePatterns Kinesin motor domain signature. 370 381 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lele45g0629 711 FunFam Kinesin-like protein 130 474 - -
Lele45g0629 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 470 IPR027417 -
Lele45g0629 711 Coils Coil 630 650 - -
Lele45g0629 711 PANTHER KINESIN-RELATED PROTEIN 6 67 708 - -
Lele45g0629 711 Pfam Kinesin motor domain 154 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0629 Lele-ChrLele45 5192998 5197943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0629 148 471 Calmodulin-binding Proteins AT5G65930 35.629 1.26e-43 167