Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0615 ATGCGGACGCGGTACACTACAATGCTAGGGCAAGAGGTGGGGCCCCCACATCAGCGCCGACGATCCAGCCGGGCAAGACGTGACGCGTGGTCTCGCCTGAGAACAACAGAGATATTGAGGGATTGTGGTAGCCGAAGAGAGCTTGCTTGGTATCAAAATAGTGTGGCATTTGGTTTCTCATATGCCTCATGTGAGATGAAGAGGAAGGCCTATTTCCCTCTTCTCATTGCCTTCTTCGTAGGCGCAGTCTCTCTCTCTGCCTCCGCCGATGTCCCCATTACCAGCCATGGAGCTCTCACTGACGCCGAGACCATGTACATCAGGCAACGGCAGCTTCTTTACTACAGGGATGAGTTCGGCGACAGAGGAGAACAAGTCACCGTCGATCCTTCCCTGGTTTTCGAGAACAATCGCATTAGAAATGCTTATATAGCCTTGCAAGCTTGGAAGCAAGCCATTCTTTCCGATCCGAACAATTGTACGCTCAATTGGGTGGGAGCCAATGTCTGTAACTATAGTAACGTTTTCTGTGCTCAGGCGCTCGACAACTCAAAGATTCGTACTGTCGCCGGCATTGATCTCAACCACTGTGACATTGCTGGGTACTTGCCGGAAGAGCTTGGACTACTCTCCGATCTTGCTCTCCTCCACATCAACACTAACAGGTTCTGCGGTACTGTTCCTCACAAGTTTGATAGACTGAAACTTCTGTTTGAACTCGATCTCAGTAACAATAGGTTCGCCGGGAAGTTCCCCACGGTGGTTCTGAGGCTTCCCGCTCTCAAGTTCCTGGATCTGAGATTCAATGAATTTGAAGGGACTGTGCCTAGAGAGCTTTTTGATAAGGATCTGGACGCGATCTTTATAAACAACAATCGTTTTGTGTTCGATCTTCCTGACAATTTTGGGAACTCTCCGGTGTCGGTCATCGTCGTCGCCAACAATAAGTTCCATGGCTGTCTCCCGGCGAGCTTGGGCAACATGACGAACCTGAACGAGATCATTCTGTTGAATAATGCCCTCCGTTCATGCTTGCCGTCAGAGATTGGCTTACTGAAGAACTTGACAGTGTTCGACGTGAGCTTCAATCAGCTGTTGGGTCCTTTGCCAGACACCATTGGAGGCATGGTGAGCCTTGAGCAGTTGAATGTAGCTCACAATTTGCTTTCTGGGAAAATTCCAGGGAGCATTTGTATGCTGCCAAATTTACAGAACTTTACATATTCATATAACTTCTTCACTGGTGAGCCACCGTCGTGCCTCAGCTTGCCGTCGTTCGATGATCGGAGGAACTGCTTGCCGGCTAGGCCATTACAGAGGTCAGCGGCACAATGCAAGGCTTTCTTGTCACGGCCTGTGGACTGTAACTCGTTTAAATGTAAGCCATTTGTCCCGTCGCTTCCTCCACCTCCTAACCCTTCCCCTCCGATTCCCGTACCTTCTCCACCACCCGTTGTCGTACCTTCACCTCCTCCATCACCGGTTTACGTTCCACACTCTCCGCCTCCACCTTCGCCGCCGCCACCTTCGCCTCCACCTCCGGTGTATTCGCCCCCACCGCCTCCTCCATCGCCACCTCCGCCGGTTTATTCGCCACCTCCTCCTCCACCAGTCTACTCTCCACCTCCTCCTCCACCTTCACCTCCTCCGCCAGTCTATTCTCCGCCCCCGCCCCCGCCCCCGCCCCCGCCGCCACCTCCCCCTCCCCCTCCTTCACCACCCCCACCAGTCTATTCACCACCTTCACCTCCACCTCCTTCTCCATCGCCACCTCCACCCTCACCGCCCCCTCCATCTCCTCCACCCCCATCACCCACTCCAACGCCACCATATTGCGTCCGTTCTCCACCGCCACCACCACCAAATTCACCACCGCCACCGTCTCCTGTATTTTACCCACCACCGTCTTACAGCTCTCCTCCGCCGCCTCATCACTCCCCTCCACCACCTTATCACTCTCCTCCACCTCCTCCTCACTCACCTCCGCCGCCTATTTATCCCTATTTATCACCGCCACCTCCTCCTCCAGTCCATTCTCCTCCTCCCCCTGTCCATTCTCCACCCCCACCTTGTATAGAACCACCTCCACCCCCACCACCTTGTGAAGAGCATCCACCACCGCAACCTTCTCCCACACCTTATTTACCACCTCCATCCCCATCTCCCCCTCCACCGCCATCTCCTGTGCACTACAGTTCGCCGCCGCCAGCCGTTCATTATAGTTCTCCCCCACCACCAGTATACCCTTCAACTCCACCACCATCACCGCCTCCCTGTGAAGAAACTCCGCCTTCTACATCCCCACCGCCACCGGTCACATACGGAAACCCTCCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCTTCGGAGTCTCTTACGCATCTCCACCTCCACCACCCTTCTATTGA 2415 0.5437 MRTRYTTMLGQEVGPPHQRRRSSRARRDAWSRLRTTEILRDCGSRRELAWYQNSVAFGFSYASCEMKRKAYFPLLIAFFVGAVSLSASADVPITSHGALTDAETMYIRQRQLLYYRDEFGDRGEQVTVDPSLVFENNRIRNAYIALQAWKQAILSDPNNCTLNWVGANVCNYSNVFCAQALDNSKIRTVAGIDLNHCDIAGYLPEELGLLSDLALLHINTNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPTVVLRLPALKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNLNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPGSICMLPNLQNFTYSYNFFTGEPPSCLSLPSFDDRRNCLPARPLQRSAAQCKAFLSRPVDCNSFKCKPFVPSLPPPPNPSPPIPVPSPPPVVVPSPPPSPVYVPHSPPPPSPPPPSPPPPVYSPPPPPPSPPPPVYSPPPPPPVYSPPPPPPSPPPPVYSPPPPPPPPPPPPPPPPPSPPPPVYSPPSPPPPSPSPPPPSPPPPSPPPPSPTPTPPYCVRSPPPPPPNSPPPPSPVFYPPPSYSSPPPPHHSPPPPYHSPPPPPHSPPPPIYPYLSPPPPPPVHSPPPPVHSPPPPCIEPPPPPPPCEEHPPPQPSPTPYLPPPSPSPPPPPSPVHYSSPPPAVHYSSPPPPVYPSTPPPSPPPCEETPPSTSPPPPVTYGNPPPAPVYEGPLPPVFGVSYASPPPPPFY 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0615 804 Gene3D Ribonuclease Inhibitor 303 444 IPR032675 -
Lele45g0615 804 FunFam Leucine-rich repeat extensin-like protein 5 305 444 - -
Lele45g0615 804 Gene3D Ribonuclease Inhibitor 143 302 IPR032675 -
Lele45g0615 804 SUPERFAMILY L domain-like 144 426 - -
Lele45g0615 804 MobiDBLite consensus disorder prediction 1 27 - -
Lele45g0615 804 MobiDBLite consensus disorder prediction 493 804 - -
Lele45g0615 804 FunFam Leucine-rich repeat extensin-like protein 1 143 304 - -
Lele45g0615 804 PRINTS Proline rich extensin signature 464 485 - -
Lele45g0615 804 PRINTS Proline rich extensin signature 510 527 - -
Lele45g0615 804 PRINTS Proline rich extensin signature 488 504 - -
Lele45g0615 804 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 85 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0615 Lele-ChrLele45 5056362 5060376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0615 88 506 Leucine-rich Repeat extension Gene Families AT3G24480 71.429 0.0 618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0615 45 5056362 5060376 Lele47g0776 47 14080020 14082245 hybridization
Lele45g0615 45 5056362 5060376 Lele48g0825 48 13580438 13582639 hybridization