Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0611 ATGATGTGGTGTTCTGAGGCTTATGAATGCTCTGGATTCTGGATAGGTTCAACTTTCTTCTATTTCCATGAGACTTATTCTGAAGTTGGCTGTTACTGGTGTTTAGTTTCTGGTGTCCAAAGCCTTTCTTCCAGTGTGCAAAGCACTCCGGAAAAAAATGGTCATTCAGATTATGCTTCAAGAAGTCCTGAACTCCTTCAAGAGTTCTTGAAATCTTGTGATAAGAAGGAACTTCTTCGAGCGTGCTTTTTTAAGGACAGAAAGAACATTTCATCAAAAAGAAAGATGCCAGAAACTAAGTCGACCAGTAAGGTTGTCAAGAAACAGGACAACAAGAAAGTTTCTACTATCAGCAACCAGCCCTCTAGGAAGCAGCATAGGAAGAGAAAAAACCCTACTAGGCTCAGACCAGTTCCCGACAAGCCTTCTGATTCTGGACATTCAGACTCCTGGATCTGGATACTTAGATGTTGGAAGAAGCAGCTAAATGTAGCAAAAGATGCTCGGCGAGTTGATGTGCTCTGTTATAGGTTATATTTGAGTTATAGGCTCTTGGATGGGACTTCTAGGTTTAAAGAATTGCATGACATTGTAGTCGAGGCAAAAGCAAAGCTAGAAACAGAAGTGGGTCCAGTTAATGGAACTTCTGATAAGATGGTGCGAGGCATTGTCAGCAGACTCTCTATTGCCAGTGAGGTGCAGAAACTTTGCTCTCGTGCTATGGAGAAAGCTGATGGGTGGTCGTCCGTTGTGAATCCAGATTCCATAGATGGTTCCCTTCCTGCTGCCTGCAAATTTGTTTTCGAAGAGGTAACAGCTTCCTCAGTCAAAATCATTTTGATTAACAAGTCTCCTGCATCTTCTAAGGACATTAAGGGCTACAAGCTCTGGTACTACAAGAGTAATGAGGAGTTGCTTGAAACCGATCCTGTTTGTGAGGTCCCAAATAATCAGAAGAGGATTCTGTTACCCAACCTCCAGCCGGGCACAGAATATACTTTTCGCATTATATCTTATACAGATATGGGTCAGCTGGGTTATTCTGAAGCCAAGTGTTTCACCAAGAGCGCTGATCCAGCTAAAAATGGTCCCTCTTTTCCAATTGATTTAGGTCGTAAAAAAGAGAACCTTGAAATTGGAGCCAGTTCATCTGGCTCCAAAACTGAGCCCAATCCTACAGTAGCAGATTCAGGATTTAAGGTTCGGGACCTTGGGAAAGTTGTGGGTCATGCTTGGACTAAAGATCAAGGTCTCTTGGAAGGGTTTTGCAGTGTTGATACAAAACATTGCTGTAGGGAAACTGAAATGGTCAAGCCTAAAATTTCAGAAGAGCAGTTGCCTGCAGTTTCACGGGGTCTTGATTTAAATGTTGTTTCAGTGCCTGATCTGAATGAAGAACTAGTCCCTCCTTTTGAGTCTTCCAAGGATGAAGATAATGGCTTCCCTTGGCAGACAGCTGTCGAGGCAGATGATGACGCTGCTTCTCGATATGCGCAGAAAAACAGTTTAGCAAAATCGCATGGTAGTGATGACTCCCATATCTGGATGAACGGGCCAATTGGAGAAGTTCCAACTGTTGACTTCCGCGTAGACACATGCAAGAAAAGGGTAGCTAGCATCAATGAAGAGACACATGATTGCAATAGTACTTTGGCGAATGGCTCTCCTCTCGGAGTGTCTGATGGAACATGCTCCCTGGATGAAAACTATGAGTATTGTGTAAAAGTATTTCGGTGGCTAGAATGTGAGGGTCACATCAAGCAAGAATTCCGGTTGAAGTTGCTAACATGGTTTAGTTTGAAGTCAACGGAGCAGGAACGCAGGGTTGTGAATACCTTCATTCAAACTCTGCTTGATGATCCATGTAGTTTGGCAGGGCAACTGATTGACTCATTTTCTGATATCATATCCAACAAGAGGCCCAGAAATGGATGA 1935 0.432 MMWCSEAYECSGFWIGSTFFYFHETYSEVGCYWCLVSGVQSLSSSVQSTPEKNGHSDYASRSPELLQEFLKSCDKKELLRACFFKDRKNISSKRKMPETKSTSKVVKKQDNKKVSTISNQPSRKQHRKRKNPTRLRPVPDKPSDSGHSDSWIWILRCWKKQLNVAKDARRVDVLCYRLYLSYRLLDGTSRFKELHDIVVEAKAKLETEVGPVNGTSDKMVRGIVSRLSIASEVQKLCSRAMEKADGWSSVVNPDSIDGSLPAACKFVFEEVTASSVKIILINKSPASSKDIKGYKLWYYKSNEELLETDPVCEVPNNQKRILLPNLQPGTEYTFRIISYTDMGQLGYSEAKCFTKSADPAKNGPSFPIDLGRKKENLEIGASSSGSKTEPNPTVADSGFKVRDLGKVVGHAWTKDQGLLEGFCSVDTKHCCRETEMVKPKISEEQLPAVSRGLDLNVVSVPDLNEELVPPFESSKDEDNGFPWQTAVEADDDAASRYAQKNSLAKSHGSDDSHIWMNGPIGEVPTVDFRVDTCKKRVASINEETHDCNSTLANGSPLGVSDGTCSLDENYEYCVKVFRWLECEGHIKQEFRLKLLTWFSLKSTEQERRVVNTFIQTLLDDPCSLAGQLIDSFSDIISNKRPRNG 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0611 644 Gene3D Immunoglobulins 259 365 IPR013783 -
Lele45g0611 644 CDD FN3 265 354 IPR003961 GO:0005515
Lele45g0611 644 SUPERFAMILY Fibronectin type III 269 354 IPR036116 GO:0005515
Lele45g0611 644 MobiDBLite consensus disorder prediction 93 147 - -
Lele45g0611 644 Pfam Fibronectin type III domain 266 347 IPR003961 GO:0005515
Lele45g0611 644 PANTHER VIN3-LIKE PROTEIN 2-RELATED 153 644 IPR044514 GO:0010048|GO:0040029
Lele45g0611 644 MobiDBLite consensus disorder prediction 93 111 - -
Lele45g0611 644 ProSiteProfiles Fibronectin type-III domain profile. 260 359 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0611 Lele-ChrLele45 4997819 5001330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0611 154 644 PHD Gene Family AT3G24440 44.800 7.57e-126 383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0611 45 4997819 5001330 Lele47g0780 47 14137516 14141399 hybridization
Lele45g0611 45 4997819 5001330 Lele48g0829 48 13642778 13646716 hybridization