Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0602 ATGGCGATGGTAGACAGCATTGTCATTCTCTTTCTTCTCCTTATGCTTCTTCTGATCATCGTCCTCATCATTTTTGCCTGCAAACCATGGCGCTTCTTCTTATCTTCGCGACCCCGCTCATCCATCAAGGATGGTGACATAGAGAGGCCCCTAGTCGTAGATGATGCAAATGCTTCACGTAATCAGAGCAATGAATTGCCCCGAGACTATGATCTTGAGGGTGCATGCTTTTTCAATGAGGGTCCTTTTCGCTCACCACGATCACATGGACTTGTTCATAAGCAAAGGCTTCCCGCTTCTTCTCCTAATGTGCCACAAGGTGATAGTTTGGTTTTAGATCTAACTTCTGATGCTCCAGAAGAAGTTGCATTGGGTCAAACACTTAAGCTTCCCCCAGCCCAGTTAGCTGAAATTCAAAAGCATGCTAGAGTGAATTTTGAAGAGCATAGATTGGAGGACACTGTGCAAAGAGATATCTTAGATCAAAGAAGTTGTCTCACTCTGGAGGTTATCAGTGGTCCTTCTTGTGGAGTTCGTTGTTCTGTACAATCAACAAATCCTTCTCATCTACCTCTGACAATTGGAAGAATTTCTCCAAGTGATTTATTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCTCTAATAAATTGGAATTTAGATAAATTGAAATGGGAGTTGGTAGATATGGGTAGCCTGAATGGAACACTTTTGAATTCTCGGTCAATCAACCATCCAGACACTAGCAACAGGCTTTGGGGTGAGCCATTTGAGCTTGCCAATGGAGATATTATAACTCTTGGAACAACATCAAAAGTCGTTGTCCGTGTTTCTTCTGAAAGTAGGCATCAAATTCCGTTTGGAGTAGGTATGGCATCAGATCCCATGGCTTTACGTCGAGGAGGGAAAAAGCTACCTATGGAAGATGTTTGCTATTATCAATGGCCTCTTCCTGGGCTGGATCAGTTTGGACTATTTGGCATCTGTGATGGGCATGGTGGAGATGGGGCTGCTAAATCTGCTAGCAAACTTTTTCCCGAAATAGTTGCTAGCATATTATCAGATTCATTAAAAAGAGAGAGGGTTTTATCACTACATGATGCATCTGATGTTCTTAGAGAGGCATTTTCTCAAACAGAAGCAAGCATGAATCACCATTATGAGGTCCAGGTCCTTGCATTCAAGGATTCCATGGGGAAGAGCATGGGAATTAAGGGATGTACAGCAACATTGCTTCTGGTGTGGGTTGATGGTGATGAAAATTTCTATGCACAATGTGCAAATGTTGGGGACTCTTCCTGTGTTATGAGTGTCAATGGGGAACAGATCAACATGACAAAAGATCATAAGATAGCAAATTCTTCTGAAAAACTCCGAATTGAAGAGAGGGGTGAGCCATTGAAAGATGGGGAAACACGTCTATACGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTCAAAGAAAGGGATTCCCGGTTTAGTTCAGAGCCTTATGTAAGTCAAGCAGTGCATATTGATCAAACAAGCCGGGCTTTTGCCATTCTAGCTAGCGATGGTTTGTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTGGTGCTTCAGGCGAGAGACATCTCGTCACTTGCAGAGAATTCTGCAGAAAAGGTTGCTAATTTCTTGGTGGGTGAGGCTAGAACACTCAGAACAAAGGATAATACCTCTGTAATTTTCGTAGATTTTGATAACTTCGCTAGATCCTCTTGTAAATCCGAGTCCTAG 1767 0.4261 MAMVDSIVILFLLLMLLLIIVLIIFACKPWRFFLSSRPRSSIKDGDIERPLVVDDANASRNQSNELPRDYDLEGACFFNEGPFRSPRSHGLVHKQRLPASSPNVPQGDSLVLDLTSDAPEEVALGQTLKLPPAQLAEIQKHARVNFEEHRLEDTVQRDILDQRSCLTLEVISGPSCGVRCSVQSTNPSHLPLTIGRISPSDLLIKDSEVSGKHALINWNLDKLKWELVDMGSLNGTLLNSRSINHPDTSNRLWGEPFELANGDIITLGTTSKVVVRVSSESRHQIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIVASILSDSLKRERVLSLHDASDVLREAFSQTEASMNHHYEVQVLAFKDSMGKSMGIKGCTATLLLVWVDGDENFYAQCANVGDSSCVMSVNGEQINMTKDHKIANSSEKLRIEERGEPLKDGETRLYGINLARMLGDKFLKERDSRFSSEPYVSQAVHIDQTSRAFAILASDGLWDVISMKKAIQLVLQARDISSLAENSAEKVANFLVGEARTLRTKDNTSVIFVDFDNFARSSCKSES 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0602 588 Gene3D - 297 583 IPR036457 -
Lele45g0602 588 CDD PP2Cc 300 576 IPR001932 -
Lele45g0602 588 PANTHER PROTEIN PHOSPHATASE 2C 299 575 IPR015655 GO:0004722|GO:0006470
Lele45g0602 588 FunFam Protein phosphatase 2C 70 161 295 - -
Lele45g0602 588 SUPERFAMILY PP2C-like 301 578 IPR036457 -
Lele45g0602 588 FunFam Protein phosphatase 2C 70 296 583 - -
Lele45g0602 588 Pfam Protein phosphatase 2C 299 569 IPR001932 -
Lele45g0602 588 CDD FHA 166 279 IPR000253 GO:0005515
Lele45g0602 588 SMART FHA_2 191 243 IPR000253 GO:0005515
Lele45g0602 588 ProSiteProfiles PPM-type phosphatase domain profile. 288 576 IPR001932 -
Lele45g0602 588 ProSiteProfiles Forkhead-associated (FHA) domain profile. 192 243 IPR000253 GO:0005515
Lele45g0602 588 Gene3D - 161 296 - -
Lele45g0602 588 Pfam FHA domain 193 268 IPR000253 GO:0005515
Lele45g0602 588 ProSitePatterns PPM-type phosphatase domain signature. 325 333 IPR000222 GO:0043169
Lele45g0602 588 SMART PP2C_4 283 574 IPR001932 -
Lele45g0602 588 SUPERFAMILY SMAD/FHA domain 164 275 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0602 Lele-ChrLele45 4850717 4858317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0602 1 577 PP2C-type Phosphatase Gene Family AT5G19280 56.198 0.0 658