Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0594 ATGGATCAAAACCACCATGGGCTGTCTGGTGCTTCTGCTCAAGGGGCATATGGAATGAATCAGTATCAATCTAACCCAATGATGGCTGCTCCTCAGTCTCCTTCTCAGGCAGCATCAGGTCCTCCTGCATCATCTTCTTCCTTCCTGAGAGAGCAACAATATGCTCACCAATACATGAATCAGCTTCAGCAACAGGAGCTGCGGCAACAACTCCAGAACTTCTGGGCAAATCAGTATCATGAGATTGAGCAGATTGTTGATTTCAAGAACCATAGCCTGCCTTTAGCTCGGATCAAGAAGATCATGAAGGCTGATGAGGATGTGAGGATGATATCAGCTGAGGCTCCAGTTATATTTGCCAGGGCCTGTGAGATGTTCATCCTGGAGCTAACACTCAGGTCTTGGATCAACGCTGAGGAGAACAAGAGGAGGACACTTCAGAAGAATGACATTGCTGCAGCAATCACAAAGACTGATGTGTTTGATTTCCTGGTTGATATTGTGCCAAGAGATGACTTGAAGGATGAAATGCTCTCTGCAACAGTTCCCAGAGTCCCACCAGCAACAGCATCAGCAGCAGCAGAGAATGTTCCTTACTACTACATGCCACCTCAGCAAGTTGTGGGCCCTCCTCCTCCTCATTCTCCATATGGAGCTCCAAAAGTGATCATGGGTAGGCCTGTAGTTGATCAAGCTCATTATGGCCAGCCAGCAGCACACCCTTCTTTCTCTGCACAAGTGTGGCCACACCAGCAAAACCCATCAAACAACAATTCGGATTCTTGA 786 0.4758 MDQNHHGLSGASAQGAYGMNQYQSNPMMAAPQSPSQAASGPPASSSSFLREQQYAHQYMNQLQQQELRQQLQNFWANQYHEIEQIVDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWINAEENKRRTLQKNDIAAAITKTDVFDFLVDIVPRDDLKDEMLSATVPRVPPATASAAAENVPYYYMPPQQVVGPPPPHSPYGAPKVIMGRPVVDQAHYGQPAAHPSFSAQVWPHQQNPSNNNSDS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0594 261 MobiDBLite consensus disorder prediction 23 46 - -
Lele45g0594 261 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 92 155 IPR003958 -
Lele45g0594 261 FunFam Nuclear transcription factor Y subunit gamma 57 170 - -
Lele45g0594 261 SUPERFAMILY Histone-fold 50 164 IPR009072 GO:0046982
Lele45g0594 261 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 44 192 - -
Lele45g0594 261 MobiDBLite consensus disorder prediction 230 261 - -
Lele45g0594 261 MobiDBLite consensus disorder prediction 245 261 - -
Lele45g0594 261 Gene3D Histone, subunit A 54 170 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0594 Lele-ChrLele45 4780722 4781507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0594 1 227 CCAAT-HAP5 Transcription Factor Family AT1G08970 59.031 9.93e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele45g0594 CBFD_NFYB_HMF 4.8e-17 CL0012