Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0589 ATGGCTTTTGAGAAGCCATATCAAATCTTGTTTTTCATCTTTTCCGCCTTGCTTTCGCATTCTGTAGCCGCTCAGGGTTACAAGAACATATCCTTGGGAACTTCACTCACTGCAGTGGAAAATGGCTCCTTCTGGGCTTCACCATCTGAGAAAACTATCGTCTGGTCAGCCGTGCGTGACATGGGCGATGCAATTATTGCCCCAAAGGGTTCAAAAGTTGGGCTCACCTCAGATGGTTCTTTCCAACTGGTTGATCCCAGTGGTAAGCAAATTTGGAGCCCTAGTGGAAATGGAGTTGCTCATGCTGCTATGTTTGATACTGGTAACTTTGTGCTGGTTGGAAGTGGAGCTTGTGGATTCAACAGCTACTGTATTTTTAATAATGGCATAAAAAGTTGCAAGTGTCCAAATGGTTATAGCTTCATTGATCCAAACGATGTGATGAGAGGATGCAAACAAGACTTTGTTCCACAGAGTTGTGATGAAACTTCTTCACAAGCACATCTCTTTGATTTAGCTGAGAAGACACAGATTTCCCGCATTCTGACTATGAGCACTTCGATCAAGAACAAATGGGTTCACAGAAGAATTGGGCCGCGTGCATTTTCTACTGTTTATAAAGGTGTTCTACCGGACATTCCAGGGAACCTTGTTGCTGTTAAAAGACTAAAAATGGTGAATGAAAGTGACCAGGAATTTGAAGCAGAAGTGAGCGCAATTGGTCAAACACACCATAGGAATTTGGCAAAACTTCTGGGATTCTGCAGGGAAGGGAGCACAGGCTGCTTGTATTTCGGTTTAGCGAAGCTATTGAAGATTGACCAGACTGCAACTACAACAGCAATTAGGGGAACTAAAGGGTATGTTGCGGCTGAGTGGTTCAGGAACAAGCCAATTACCACGAAAGTTTTTATTGATAAGTTTCACTTATGCAGAGTTAATGGAAGGAACAAATGGGTTCACAGAAGAATTGGGCCGCGTGCATTTTCTACTGTTTATAAAGGTGTTCTACCGGACATTCCAGGGAACCTTGTTGCTGTTAAAAGACTAAAAATGGTGAATGAAAGTGACCAGGAATTTGAAGCAGAAGTGAGCGCAATTGGTCAAACACACCATAGGAATTTGGCAAAACTTCTGGGATTCTGCAGGGAAGGGAGCACAGGCTGCTTGTATTTCGGTTTAGCGAAGCTATTGAAGATTGACCAGACTGCAACTACAACAGCAATTAGGGGAACTAAAGGGTATGTTGCGGCTGAGTGGTTCAGGAACAAGCCAATTACCACGAAAGTTTTTATTGATAAGTTTCACTTATGCAGAGTTAATGGAAGGAACAAATGGGTTCACAGAAGAATTGGGCCGCGTGCATTTTCTACTGTTTATAAAGGTGTTCTACCGGACATTCCAGGGAACCTTGTTGCTGTTAAAAGACTAAAAATGGTGAATGAAAGTGACCAGGAATTTGAAGCAGAAGTGAGCGCAATTGGTCAAACACACCATAGGAATTTGGCAAAACTTCTGGGATTCTGCAGGGAAGGGAGCACAGGCTGCTTGTATTTCGGTTTAGCGAAGCTATTGAAGATTGACCAGACTGCAACTACAACAGCAATTAGGGGAACTAAAGGGTATGTTGCGGCTGAGTGGTTCAGGAACAAGCCAATTACCACGAAAGTAGAAGAGTATGTGAAGATCAGTATCTGGTGTATTCAAGAGGAGCCATCAGTAAGACCCACCATGAAGCAAGTTGTACAAATGGTTGAAGGATTCATAGATGTCCTAAATCCTCCTGATCTACCATCTTTTACAAGTAGGTGGTAG 1815 0.4298 MAFEKPYQILFFIFSALLSHSVAAQGYKNISLGTSLTAVENGSFWASPSEKTIVWSAVRDMGDAIIAPKGSKVGLTSDGSFQLVDPSGKQIWSPSGNGVAHAAMFDTGNFVLVGSGACGFNSYCIFNNGIKSCKCPNGYSFIDPNDVMRGCKQDFVPQSCDETSSQAHLFDLAEKTQISRILTMSTSIKNKWVHRRIGPRAFSTVYKGVLPDIPGNLVAVKRLKMVNESDQEFEAEVSAIGQTHHRNLAKLLGFCREGSTGCLYFGLAKLLKIDQTATTTAIRGTKGYVAAEWFRNKPITTKVFIDKFHLCRVNGRNKWVHRRIGPRAFSTVYKGVLPDIPGNLVAVKRLKMVNESDQEFEAEVSAIGQTHHRNLAKLLGFCREGSTGCLYFGLAKLLKIDQTATTTAIRGTKGYVAAEWFRNKPITTKVFIDKFHLCRVNGRNKWVHRRIGPRAFSTVYKGVLPDIPGNLVAVKRLKMVNESDQEFEAEVSAIGQTHHRNLAKLLGFCREGSTGCLYFGLAKLLKIDQTATTTAIRGTKGYVAAEWFRNKPITTKVEEYVKISIWCIQEEPSVRPTMKQVVQMVEGFIDVLNPPDLPSFTSRW 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0589 604 Gene3D - 23 126 IPR036426 -
Lele45g0589 604 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 195 260 - -
Lele45g0589 604 SMART tyrkin_6 320 585 IPR020635 GO:0004713|GO:0006468
Lele45g0589 604 Pfam Protein tyrosine and serine/threonine kinase 194 263 IPR001245 GO:0004672|GO:0006468
Lele45g0589 604 Pfam Protein tyrosine and serine/threonine kinase 321 390 IPR001245 GO:0004672|GO:0006468
Lele45g0589 604 Pfam Protein tyrosine and serine/threonine kinase 448 516 IPR001245 GO:0004672|GO:0006468
Lele45g0589 604 ProSiteProfiles Protein kinase domain profile. 191 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0589 604 SUPERFAMILY Protein kinase-like (PK-like) 315 430 IPR011009 -
Lele45g0589 604 SUPERFAMILY Protein kinase-like (PK-like) 440 592 IPR011009 -
Lele45g0589 604 ProSiteProfiles Bulb-type lectin domain profile. 8 125 IPR001480 -
Lele45g0589 604 SUPERFAMILY alpha-D-mannose-specific plant lectins 47 116 IPR036426 -
Lele45g0589 604 Gene3D Phosphorylase Kinase; domain 1 318 392 - -
Lele45g0589 604 Gene3D Phosphorylase Kinase; domain 1 159 265 - -
Lele45g0589 604 Gene3D Phosphorylase Kinase; domain 1 445 519 - -
Lele45g0589 604 SUPERFAMILY Protein kinase-like (PK-like) 182 303 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0589 Lele-ChrLele45 4726856 4738499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0589 324 599 Receptor kinase-like Gene Family AT5G39030 27.742 3.27e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele45g0589 PK_Tyr_Ser-Thr 1.3e-05 CL0016