Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0584 ATGGGAATTTCTTCCAGTAGCGGAACAAGAAGCAATTATTTCCATAACCCACATCTTCCGCCACCTTTCTATTATTCGGCAGAATCTCCTCCTCCGCCTCCTCAAGGCTCTACTATTTTACCTCATCAACACCTTATGCACGGCAAATCAACAACTATGTTTCAGTATCCCCCATGTTATTATGTAAATCATGCTAATGGATGGCCTGCAATTTATCCTTCGGTTGTTGCTCTTGTCGTCTCGCCACCGCCCTATGTTGATCATCGAACGGCTAAGAAGATCAGGAACGATGTGAACGTGCATAAAGATACATTGCGGCTGGAGGTAGATGACCATTACCCTGATCAGCGCTTGGTTTCATTCTATTTTGTTGCCTTACATGATGGGAGCATTACAATAATCTACTTTGCGAAGGAGGAGGGCAAATGTAGGTTTGTACCATTTTTTCCCAATGTATTTAAGCCAATAAGAATCCCTTTTCAGAAAGGAATAGGCCAGAAATTTTGTCAGCCCTCAGGAACAGGCATTGACAAAGAGTTTTTCGAGTTGGATGATCTGTCAAAACCCTCACTTGGAGATGATGTCTTCCCCCTTGTGATATGTGCTGAAACGTGTTTGATAACTTCATCAGCAGATGAAAATCTTGGCAATTCGGTCCTAGATTTTTCTCCTTGCATGCAGATTACTCAAGCCATCGTAGAGAAAGGCAATGGTGATGTTCCTTTACAAGTAAAAGTAGACAGGCAGATTCTGTGGATTGATGGGGTCCGTTATGAGTTAAGAGAGTTATATGGAATGGGAGTCTCAGCAGCAGCTGGTTTTGATGACAATGATTCTGGGAAGGAGTGCGTGATATGCATGACTGAACCAAAGGACACAGCTATATTACCTTGTCGACACTTGTGCATGTGCAGTGACTGCGCACAAGTTTTGTGGCTTCAATCGAACAAATGCCCAATATGTCGCCAATCTATCGAGGAACTTATAGAAATTAAGATAAACAATGGTGATTCTTGGGATCTTAGATGCAATAAAGAGTCTGGAGCTAATACTGCCTTACAAGTTAGCATTTCTGTTGGACAAAGTTCAGAATCTTCTAAGCTTGTACAGGTCAGAGGCTGCCGACTTCTTTGA 1134 0.4242 MGISSSSGTRSNYFHNPHLPPPFYYSAESPPPPPQGSTILPHQHLMHGKSTTMFQYPPCYYVNHANGWPAIYPSVVALVVSPPPYVDHRTAKKIRNDVNVHKDTLRLEVDDHYPDQRLVSFYFVALHDGSITIIYFAKEEGKCRFVPFFPNVFKPIRIPFQKGIGQKFCQPSGTGIDKEFFELDDLSKPSLGDDVFPLVICAETCLITSSADENLGNSVLDFSPCMQITQAIVEKGNGDVPLQVKVDRQILWIDGVRYELRELYGMGVSAAAGFDDNDSGKECVICMTEPKDTAILPCRHLCMCSDCAQVLWLQSNKCPICRQSIEELIEIKINNGDSWDLRCNKESGANTALQVSISVGQSSESSKLVQVRGCRLL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0584 377 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 332 IPR013083 -
Lele45g0584 377 PANTHER MAHOGUNIN 24 332 IPR045194 GO:0061630
Lele45g0584 377 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 282 322 IPR045195 -
Lele45g0584 377 Pfam Zinc finger, C3HC4 type (RING finger) 281 327 - -
Lele45g0584 377 ProSiteProfiles Zinc finger RING-type profile. 283 322 IPR001841 -
Lele45g0584 377 FunFam probable E3 ubiquitin-protein ligase LOG2 267 332 - -
Lele45g0584 377 SUPERFAMILY RING/U-box 277 328 - -
Lele45g0584 377 SMART ring_2 283 321 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0584 Lele-ChrLele45 4634321 4637595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0584 57 337 C3H Transcription Factor Family AT3G06140 58.681 1.84e-105 313