Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0573 ATGGAGCAATGTTCCTTTCTGTGGTTGGAGTTTGTGACATTTTCATTTGAGATATCAATCTATCATATTTTAAGGTGTTGTATCCAAGGACTAGGTGTTAATGATTGCTCTGAATTCTTGGATGAACCAGTGTATGTCTGCATATTCCTGACTCTGGTTGAATTGGCTGGAAGGAAAATGTATGAAATTGCAATTCATGATCTTGTTAATCTGCTCTCCTGGTGTTACTTGTGTTTGACAATGGTGAGAGTTAGTGTCTTAAATGATGCTCTGAAGAGTATGTACAATGCTGAGAAACGGGGGAAGCGTCAGGTCATGATTAGGCCATCCTCAAAAGTGATCATTAAATTTCTTTTGGTGATGCAGAAGCATGGGTACATTGGAGAGTTTGAGTATGTTGATGATCACAGGGCTGGCAAAATTGTTGTTGAATTAAATGGAAGATTGAATAAATGTGGTGTTATTAGTCCCCGATTTGATGTGGGTGTCAAGGATATTGAACCTTGGACTGCAAGGCTACTTCCCTCAAGACAGTTTGGCCATATTGTCTTGACTACCTCTGCTGGTATTATGGATCATGAAGAGGCTAGAAGGAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTTTACTAG 633 0.3949 MEQCSFLWLEFVTFSFEISIYHILRCCIQGLGVNDCSEFLDEPVYVCIFLTLVELAGRKMYEIAIHDLVNLLSWCYLCLTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKDIEPWTARLLPSRQFGHIVLTTSAGIMDHEEARRKNVGGKVLGFFY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0573 210 Gene3D - 150 210 - -
Lele45g0573 210 FunFam 40S ribosomal protein S15a 81 149 - -
Lele45g0573 210 ProSitePatterns Ribosomal protein S8 signature. 180 197 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele45g0573 210 SUPERFAMILY Ribosomal protein S8 84 210 IPR035987 GO:0003735|GO:0005840|GO:0006412
Lele45g0573 210 Hamap 30S ribosomal protein S8 [rpsH]. 82 210 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele45g0573 210 Gene3D - 81 149 - -
Lele45g0573 210 Pfam Ribosomal protein S8 87 210 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele45g0573 210 PANTHER 40S RIBOSOMAL PROTEIN S15A 81 209 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele45g0573 210 FunFam 40S ribosomal protein S15a 150 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0573 Lele-ChrLele45 4536598 4541896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0573 81 210 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 95.385 3.49e-90 259