Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0556 ATGGGTTGTGTCCATTGCAAGTGTTGTCGCGGCTACATTCCGCCCTCGGAATGTGGTGGTGCTAGCATCTGCCGCGGACTCGGCCCTCGCCGTCGCCAAAGGAAACACAAATTTACTCAGAGTTCATTGAAGTTTGCTCCTGTTCCTTCCCACAACTATGTTTTAGAATACTTGTTTCTCACACAGCAAGGATACTACCCTGATTCACCTGATAAAGAAAGCCAAGATACTTTCTGTATTAGGACACAGGTTCAAGGTAACCCAAACATCCATTTTTTCGGTGTCTATGATGGGCATGGTCAATTTGGTAGCCAGTGTTCGAATTTTGTTAGAGATAGGTTGATCGAAACATTATCAAATGACCCTGCATTGTTGGAGGACCCCGTTAAAGCTTATACATCAGCATTCTTGGCAACGAATTACAAATTACACAACAGTGAGATTGATGATTCTATGAGCGGCACAACTGCAATTACGGTGCTTGTTATTGGAGACACACTTTATGTTGCTAATGTTGGTGATTCCAGAGCGGTGCTGGCAGTTAAGGACGGAAATCGCGTTGTTGCTGAGAACTTATCTTCTGATCAGACACCGTTTCGGAGAGATGAATATGAAAGAGTGAAACTTTGTGGTGCAAGTGTGTTAAGTGTTGATCAGGTGGAAGGGCTTAAGGATCCTGATGTCCAAACATGGGGTGATGAAGAGAGTCAGGGAAGCGATCCTCCAAGGTTGTGGGTTCCAAATGGGATGTATCCTGGAACTGCATTTACAAGGAGTTTAGGGGATAGTTTGGCAGAGACTATTGGTGTCATTGCTACTCCAGAAGTTTCAGTGGTTCAGCTTACATCTAATAATCTTTTCTTTATTGTGGCAAGTGATGGCATATTTGAGTTCCTATCAAGCCAAACTGTTGTTAACATGGCAGCAAGCTATACAGATCCCGGTGAAGCATGTACTGCCATTGCTGGGGAGGCATATAAACTATGGTTGGAACATGAAAATCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCTTATCTAATGCTGGTACATCTGGAGTCGGACTAGATAATATTAATGTTAGTACGGCAATGCGGGTAAGGAGAGGAACTTCTGAAATATCTGCCACCACTTCATCGGATGTTTATTGTTCTATGAGGAGTGAGCTCTCTGATCAGAACATAGTTTCAATGAGAAGCCCAGCCATAATTGTCCCATCTCCATCAAGTCAAAGACCGAAAGCTGAACTGGTCAATGGTCAATTTTCTTCTTCTAATTCAGATCACAGAACCGCTCAAAGCCAGTTTCCTGGGATGGCTCTGCCCCTCCAGATTTTAGCATTCATAAGGAATCTAAAGACGATTTGCGATAAGGAGGAACGGTCAGATCGAGAAACTCAAGCTGGCAAATGGGATCGGCAGAACTGCTCCAAAGTGGCTCCTCGTTGTCTCAATGCAGATGCTGGATCGGTTGCAGTGTATGAATGA 1497 0.4369 MGCVHCKCCRGYIPPSECGGASICRGLGPRRRQRKHKFTQSSLKFAPVPSHNYVLEYLFLTQQGYYPDSPDKESQDTFCIRTQVQGNPNIHFFGVYDGHGQFGSQCSNFVRDRLIETLSNDPALLEDPVKAYTSAFLATNYKLHNSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRVVAENLSSDQTPFRRDEYERVKLCGASVLSVDQVEGLKDPDVQTWGDEESQGSDPPRLWVPNGMYPGTAFTRSLGDSLAETIGVIATPEVSVVQLTSNNLFFIVASDGIFEFLSSQTVVNMAASYTDPGEACTAIAGEAYKLWLEHENRTDDITIIIVQIKGLSNAGTSGVGLDNINVSTAMRVRRGTSEISATTSSDVYCSMRSELSDQNIVSMRSPAIIVPSPSSQRPKAELVNGQFSSSNSDHRTAQSQFPGMALPLQILAFIRNLKTICDKEERSDRETQAGKWDRQNCSKVAPRCLNADAGSVAVYE 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0556 498 Pfam Protein phosphatase 2C 76 326 IPR001932 -
Lele45g0556 498 PANTHER PROTEIN PHOSPHATASE 74 345 - -
Lele45g0556 498 Gene3D - 50 348 IPR036457 -
Lele45g0556 498 SMART PP2C_4 48 344 IPR001932 -
Lele45g0556 498 CDD PP2Cc 64 346 IPR001932 -
Lele45g0556 498 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
Lele45g0556 498 ProSiteProfiles PPM-type phosphatase domain profile. 56 346 IPR001932 -
Lele45g0556 498 SUPERFAMILY PP2C-like 48 348 IPR036457 -
Lele45g0556 498 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 51 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0556 Lele-ChrLele45 4409537 4412853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0556 1 351 PP2C-type Phosphatase Gene Family AT3G06270 66.944 4.13e-176 497