Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0552 ATGCTTAAGGACATTCTCATTTTCATATTTTCTCTGATTAACGGCATTTTGATATGCCTTGAGATTATGGTTGTTTGCAAGGTTCCTCCACCAAGGGCATGCAGACCAAGGAATGGGTCTTCTGATTCCATTTCCAGTAATGACTCTTTGGATCAACGAATACCTGAGTGTTCTTCTAGGGGTGGTGACATTGAGGAATGCTCAAGCAGTTTAGAACCCAAATCTCCTCCTTCTTCTAAGACCTCTGATTCTGAGGATCAGTCAAATAATTCCCAGTGGCATGGTTTCTTTGGTTTGTTAAAGAAAGGACCCAAAATGCGTTTCCAACCAATTCTTCCAGTTATAAGTGTTCCAAAACTCACCAGAAGAAATAGTAAGAGATATAGGGAGAACCAGGTCCCACCTCTAAATTCACCATTGAATAATCCAGCTCTCAAGACAATCTTGGACACTGAATTGTTCTGCTTCAAAGCTTCCTGGAAAAATTTCTCTCATGCAGAGATTGTCACTGCAACTAACAATTTCAGCCATGAGAATGTGATTGGTGAAGGAGGTTATGCTGTGGTTTACAAAGGCAAAATGGAAGATGGGCAATTTGTTGCAATCAAACAGCTCACAAGAGGAACTCTAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGAATTATAGTTCACGTGAATCATCCCAATATTGCTAGGTTGATTGGATATGGTGTTGAAGGGGGAATGTTTCTTGTTCTTCAGTTGTCTCCACATGGCAGCCTATCATCCATACTTTATGGACCTCGAGAGAAACTTGATTGGAGCTTAAGGTATAAGATTGCTTTTGGGACTGCTGATGGCCTTCGCTATCTACATGAGGAATGTCAAAGAAGGATAATTCACAGAGATATCAAGGCTTCTAATATTTTGCTCTCAGAGGACTTTCAAGCCATGATATCTGATTTTGGGCTTTCAAAGTGGTTACCAGACCAATGGACTCACCATACAATATCCAAAATTGAAGGCACGTTCGGCTACCTTCCTCCAGAATTCTTCATGTATGGTTTAGTAGACGAAAAGACCGATGTCTATGCTTATGGGGTGCTCTTATTGGAGCTCATTACTGGACGACAAGCTTTGGATGGCTCACAGAAAAGTTTAGTGATGTGGGCAAAACCTTTTCTATCTTCAAATAACATTAAAGAGCTTGTCGATCCATGTCTTAATGGCGCTTATGATGAAGAACAAATGAAACTTGTAGTCTTAGTAGCTTCAATGTGTGTTGATCAATCTTCAGCTGAACGACCAAACATGAGCCAGGCGATGAAGATTCTAAGAGGAGAAGAAGATAGCTTGGAGCTCATGAAATTGCGCTCCAAATCCAAAATTCAAAGGACACTCTCTGAAGAAGAACTCTTAGATGCAGAGGAGTACAACTCAAGCGAGCTTTTGAATGACAAAGATCGACATAAGAAGACCCTTATGGGAAACTGTAACTCTAATGAAGAAGAAAAACAGCAACAACAACATTCACAACTAGAGCAAGCGCTATGA 1539 0.4055 MLKDILIFIFSLINGILICLEIMVVCKVPPPRACRPRNGSSDSISSNDSLDQRIPECSSRGGDIEECSSSLEPKSPPSSKTSDSEDQSNNSQWHGFFGLLKKGPKMRFQPILPVISVPKLTRRNSKRYRENQVPPLNSPLNNPALKTILDTELFCFKASWKNFSHAEIVTATNNFSHENVIGEGGYAVVYKGKMEDGQFVAIKQLTRGTLEEMTADFLSELGIIVHVNHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLDWSLRYKIAFGTADGLRYLHEECQRRIIHRDIKASNILLSEDFQAMISDFGLSKWLPDQWTHHTISKIEGTFGYLPPEFFMYGLVDEKTDVYAYGVLLLELITGRQALDGSQKSLVMWAKPFLSSNNIKELVDPCLNGAYDEEQMKLVVLVASMCVDQSSAERPNMSQAMKILRGEEDSLELMKLRSKSKIQRTLSEEELLDAEEYNSSELLNDKDRHKKTLMGNCNSNEEEKQQQQHSQLEQAL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0552 512 ProSiteProfiles Protein kinase domain profile. 175 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0552 512 Gene3D Transferase(Phosphotransferase) domain 1 252 465 - -
Lele45g0552 512 MobiDBLite consensus disorder prediction 34 90 - -
Lele45g0552 512 MobiDBLite consensus disorder prediction 478 512 - -
Lele45g0552 512 Coils Coil 494 512 - -
Lele45g0552 512 SMART serkin_6 175 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0552 512 Gene3D Phosphorylase Kinase; domain 1 142 249 - -
Lele45g0552 512 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 252 454 - -
Lele45g0552 512 Pfam Protein tyrosine and serine/threonine kinase 178 438 IPR001245 GO:0004672|GO:0006468
Lele45g0552 512 PANTHER OS08G0249100 PROTEIN 63 481 - -
Lele45g0552 512 MobiDBLite consensus disorder prediction 38 54 - -
Lele45g0552 512 MobiDBLite consensus disorder prediction 494 512 - -
Lele45g0552 512 MobiDBLite consensus disorder prediction 478 493 - -
Lele45g0552 512 SUPERFAMILY Protein kinase-like (PK-like) 156 440 IPR011009 -
Lele45g0552 512 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 145 249 - -
Lele45g0552 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
Lele45g0552 512 ProSitePatterns Protein kinases ATP-binding region signature. 181 203 IPR017441 GO:0005524
Lele45g0552 512 MobiDBLite consensus disorder prediction 71 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0552 Lele-ChrLele45 4379607 4383178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0552 163 473 Receptor kinase-like Gene Family AT1G53420 41.379 1.28e-71 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele45g0552 PK_Tyr_Ser-Thr 4.2e-41 CL0016