Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0545 ATGGAAAACAAAGATTTCACAGGGGCCCGTAAAGTTGCTATAAAGGCTCAGCAACTATTTCCTGATCTGGAGAATATAGCTCAGATGCTTATTGCTTGTGACGTTCATTGCTCCGCGGAGAAGAAATTTTTCAATGAAAAGGACTGGTATGGAATTCTTCAAGTAGAGCAGACAGCTGATGAAGCAACAATAAGGAAGCAATATAGGAAGTTTGCTCTCCTACTTCATCCTGATAAAAACAAGTTTGCTGGCGCTGAAGCTGCATTTAAGCTGATAGGGGAAGCTCAGGCAGTGCTTTTGGACAGACAGAAACGGGCTGCACATGACAGAAACAGAACTTCGTATTGTCCAACCAGTAATATTTTTGTGAATGTTGATACTGGGCTGCAAAACCATATTAGGACCAATTTCACAAACTTGAATCCTCAGCAGCATCAGTCGAGTCGGTCAGCAGCTCAGCAGGGGTTTAATGATGGCTCCTCTACATTTTGGACTGTTTGCCCATTTTGTTCTATTAGATTCCAATATTACTTAGAAGTTCTAAATAGATCTCTGCGTTGTCAAAGTTGCAACAGGCCCTTTGTTGCATATGACGTGAGTGTGCAAGGTACAGTTCCACCAGCTTATTCAGGTCCACAACCTTTTGTGCAGCCTAAAGATGGTCCTAATCATCACTCGTTTAAGGTGGATGTTGGATCTCAAGGTAAGTCACGTGGTAGAAATGTCAATACAAAACCTTTTGATAAGAAAGTCCACACTTCCCATGTCTCTAGAAAGCTTAATGGAAAACGGCAGAGGGGGCAAGTAGTGGAAATTAGTGAAAGTTCTGATTCCATACACAGCTCTGATTCTGAAAGTGGTATGGCTTCTGATGATATCATTTCTGACGAGGATGGTATTTCTAGCAAACTAAACCATGCCACTTCTGGGGAAGAGAATGCTCGTAGATCTACACGGAAAAAACAGCAGGTTTCCTACAAGGAGAATGCAAGTGATGATGACAATGATGACATAAATGTTTCAAATAGGGCGAATGGTTTGGCCGATGATCAAGAACATCACGAGAAAGAGTTAAAGCAAAAGCAGAAGCAGAAGCATGGTGTTTACCCTGAAGACATATTACTCGATTCAGTGGAAGGTTCAAAGATGACTGCTGAAGGTAGTGAGCCTGATTCAGCCTGCAACGTAACAGAGCAGCCTAATATTATAGTCTGTCCTGATGCAGAGTTTAATGACTTTGACAAGGACAAGAAGAAAGATTGTTTTGCAGTTGGGCAGGTTTGGGCTGTTTATGATACAAATGATGGCATGCCTAGATTCTACGCTCTAATTAAAAAAGTTTTCTACTCCGGGTTCAAGCTGCGAATAACATGGTTTGAACCAGAACCGAGTGATGAGGATGAAATTAATTGGGTCAACAAGCAATTGCCAGTGGCTTGTGGAAAGTATGGGCTTAGAAACTCTGAAACCACAGAAGACCATCCCATGTTTTCTCATCGAGTTCTGTATGAAAAAATTGGAAGTAATACTTTTAAAGTTTATCCTAGAAAGGGAGAAACCTGGGCTCTCTACAAAAATTGGGATATCAAATGGTACATGGACGTGGAATCTCATCAGAAGTATGAATTCGAGTTTGTCGAAATCTTGACTGACTATGTTCAAGGTGAGGGTGTATTTATTGCATACTTGGTGAAATTAAGAGGTTTTGTGAGTCTCTTCTCTAGAGTTATGAAGGAAGGCGCCTATGCAATTAACATTCCATCAGCAGAGTTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCAGGAAAGAGTAGGTGTTCCTATAGGATCTTGGGAACTTGATCCTGCGGCTTTGCCTTCGAATCTCGAAGAGGTTGCTGTTCCCAATGATTTGAAAGTGAAGGCTGGCCATTCCCCATCCGTTGGTGTGAGTAGAAGATCTTCAGATAGATTGAAGCCCAAGATGGCACCTGATGGAGATTTACATGCTTTCCAGGCTAATTGTGAAACAAGCAATTCGGCAAAGAACAATGGTTCAGTTAACTATATTGAAGATTGTAGTGTTCCTTTGTCTTCAACCTCAGAAACTATGGAAATTCCAGATCCTCAGTTCTACAATTTTGACGATGGGAAGACCCCAGAGAAGTTTCAGGTTGGTCAGATTTGGGCATTTTATAGCGATGAAGATGGCCTACCAAGGTACTATGGTGAGATTACGGAAATCAGGAGGAGCCCAGGTCTTGAATTGCATATTATGTGGCTTGCTTCCTGCTGGCTACCAGATCACACTATTAGATGGGAAGACAAAGACATGCTTATCTCTTGTGGCAGGTTTAAAAGTAGAAATGGGAATACAAATGTTTATACAAACACACTCTCCCTTTCACATCAGGTACGCGTTAATTTTGACAGAACTAACAATGAATATTCCATCTTTCCAAGGAAAGGTGAAGTTTGGGCATTATATAGGAAATGGTCACCTCAAATCAAATGCTCCGATCTGGTAAACTGGGAGTATGACATAGTGGAAATTATTGAAGAAAATGCCTCTTGGATTGAAGTTTTAGTCATGGAGATTGTCAGCGGATATAATTCAGTTTTCAAGTTGAAAACATTTGAAGGATCAGCCATCACCATGAGAGTACCCCTGGCACAGCTGCTCAGATTCTCCCACCAAATCCCAGAATTCAAACTTACAGAGAAGCATGGCAAACTGAAAGGCTTCTGGGAGCTTGATCCAGGAGCTGTACCCGTCCACTTTTGGACTTCCCAGTAG 2790 0.4154 MENKDFTGARKVAIKAQQLFPDLENIAQMLIACDVHCSAEKKFFNEKDWYGILQVEQTADEATIRKQYRKFALLLHPDKNKFAGAEAAFKLIGEAQAVLLDRQKRAAHDRNRTSYCPTSNIFVNVDTGLQNHIRTNFTNLNPQQHQSSRSAAQQGFNDGSSTFWTVCPFCSIRFQYYLEVLNRSLRCQSCNRPFVAYDVSVQGTVPPAYSGPQPFVQPKDGPNHHSFKVDVGSQGKSRGRNVNTKPFDKKVHTSHVSRKLNGKRQRGQVVEISESSDSIHSSDSESGMASDDIISDEDGISSKLNHATSGEENARRSTRKKQQVSYKENASDDDNDDINVSNRANGLADDQEHHEKELKQKQKQKHGVYPEDILLDSVEGSKMTAEGSEPDSACNVTEQPNIIVCPDAEFNDFDKDKKKDCFAVGQVWAVYDTNDGMPRFYALIKKVFYSGFKLRITWFEPEPSDEDEINWVNKQLPVACGKYGLRNSETTEDHPMFSHRVLYEKIGSNTFKVYPRKGETWALYKNWDIKWYMDVESHQKYEFEFVEILTDYVQGEGVFIAYLVKLRGFVSLFSRVMKEGAYAINIPSAELFRFSHRVPSFKMTGQERVGVPIGSWELDPAALPSNLEEVAVPNDLKVKAGHSPSVGVSRRSSDRLKPKMAPDGDLHAFQANCETSNSAKNNGSVNYIEDCSVPLSSTSETMEIPDPQFYNFDDGKTPEKFQVGQIWAFYSDEDGLPRYYGEITEIRRSPGLELHIMWLASCWLPDHTIRWEDKDMLISCGRFKSRNGNTNVYTNTLSLSHQVRVNFDRTNNEYSIFPRKGEVWALYRKWSPQIKCSDLVNWEYDIVEIIEENASWIEVLVMEIVSGYNSVFKLKTFEGSAITMRVPLAQLLRFSHQIPEFKLTEKHGKLKGFWELDPGAVPVHFWTSQ 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0545 929 Coils Coil 344 364 - -
Lele45g0545 929 CDD DnaJ 48 101 IPR001623 -
Lele45g0545 929 PRINTS DnaJ domain signature 68 83 IPR001623 -
Lele45g0545 929 PRINTS DnaJ domain signature 84 104 IPR001623 -
Lele45g0545 929 PRINTS DnaJ domain signature 50 68 IPR001623 -
Lele45g0545 929 ProSiteProfiles dnaJ domain profile. 48 112 IPR001623 -
Lele45g0545 929 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 675 - -
Lele45g0545 929 MobiDBLite consensus disorder prediction 268 289 - -
Lele45g0545 929 SMART dnaj_3 47 104 IPR001623 -
Lele45g0545 929 MobiDBLite consensus disorder prediction 347 371 - -
Lele45g0545 929 MobiDBLite consensus disorder prediction 309 339 - -
Lele45g0545 929 Gene3D DnaJ domain 45 166 IPR036869 -
Lele45g0545 929 Pfam Domain of unknown function (DUF3444) 401 607 IPR024593 -
Lele45g0545 929 Pfam Domain of unknown function (DUF3444) 699 906 IPR024593 -
Lele45g0545 929 MobiDBLite consensus disorder prediction 208 371 - -
Lele45g0545 929 Pfam DnaJ domain 48 109 IPR001623 -
Lele45g0545 929 SUPERFAMILY Chaperone J-domain 40 113 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0545 Lele-ChrLele45 4308247 4311036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0545 1 211 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.562 1.92e-26 110