Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0535 ATGCGTAATCATTTGCAAAATCGTTTTGCACTCATTGCCATGGAACGTCTCAGAATTGGCTCTGTTAAGCCATTGCCTTTGGTCTCTCAACTTCCGCCTCCTTCTGATGAACCTGTTGTTGCGATGGCCGACGCAGGGAAAACTATCTCCGGCAAGCGTAGTAGACAGAGAGGTGTAAAGAGGAGCGAGAGCCTTGAGATTGAGCGTGATCGGAGGTTGAAGATGAGTCATATGTTCGCTGAGCTTCAATCCACCGTTCCTGGTCTCTTTTCCAAGGCCACAAGGGAAACGATTGTGAATGAAACAATAAACTACATCAAGGACCTTGAGAAGAAGAAGAAAAGATTGGAAGAGCTTAAGGGGTTAATAATGGAACCAGAAGCAGCTGGAGGGAGTTTGATGCTTCCATGTGCAGGCAATAAGAATTCCTCTATTACAGTCTCTCTATATGGAAATGTTGCCTTCTTCGAGATTCAATCAAAAGCTCAATTTGGTTTAATCACAGTGATCTTCAAGGTGTTCTACAAGCACAATGCTGAAATTTTGGCTGCAAATATTTCTGTCAACAACGGAGAATTGACATTGGCAATCACAGCTTTATTAGGTCATGATGGTGATGATAATGATGGAAATGTTGCTGCTGAGAAAATCAAGAGAGAGATTCTGGATTTGTAG 675 0.4267 MRNHLQNRFALIAMERLRIGSVKPLPLVSQLPPPSDEPVVAMADAGKTISGKRSRQRGVKRSESLEIERDRRLKMSHMFAELQSTVPGLFSKATRETIVNETINYIKDLEKKKKRLEELKGLIMEPEAAGGSLMLPCAGNKNSSITVSLYGNVAFFEIQSKAQFGLITVIFKVFYKHNAEILAANISVNNGELTLAITALLGHDGDDNDGNVAAEKIKREILDL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0535 224 Gene3D - 52 123 IPR036638 GO:0046983
Lele45g0535 224 ProSiteProfiles ACT domain profile. 155 224 IPR002912 -
Lele45g0535 224 SMART finulus 65 115 IPR011598 GO:0046983
Lele45g0535 224 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 60 215 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele45g0535 224 Coils Coil 214 224 - -
Lele45g0535 224 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 109 IPR011598 GO:0046983
Lele45g0535 224 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 126 IPR036638 GO:0046983
Lele45g0535 224 Coils Coil 99 119 - -
Lele45g0535 224 Pfam Helix-loop-helix DNA-binding domain 61 110 IPR011598 GO:0046983
Lele45g0535 224 CDD bHLH_AtbHLH_like 68 107 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0535 Lele-ChrLele45 4227682 4228999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0535 26 117 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 37.500 4.42e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele45g0535 HLH 2.9e-07 No_clan