Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0531 ATGGGGTTTTGTGAGGGTGGCTTTCTTGTGTCTGGGTTTGATATGGGTGGGTGTTTTCCTTGCTTTGGATCATCAAACAAGGACAAAGGGTTGAAGGAAGTTGCAGTCAAGAAGGATTCCTTTAAAGAAAGTTCAATTGTTGCTAAGTCTAACCACACCAATAGGGTTAGCTCAGATAAATCAAAATCGAAAAGTGGCTCTGATCCTAAGAAGGAACCACCCGTTCCCAAGGAACCAACAGCCCATATTGCTGCACAAACATTCACATTCCGAGAGCTTGCAGCTGCTACAAAGAATTTTAGGCCAGAATGCTTATTAGGTGAAGGAGGTTTCGGGCGTGTCTACAAAGGTCGTCTTGAGAGCACAGGACAAGTAGTTGCTGTAAAACAGCTTGATCGCAATGGCCTTCAAGGAAATCGAGAATTCTTGGTGGAGGTTCTCATGCTTAGTCTCTTGCATCATCCCAATCTTGTCAACTTAATTGGTTATTGTGCTGATGGTGACCAGAGGCTTCTTGTTTATGAATTTATGCCATTGGGCTCCTTAGAGGATCATTTACATGATCTTCCTCCTGACAAGGAGCCTCTAGACTGGAACACAAGAATGAAAATTGCCGCTGGTGCTGCTAAGGGATTGGAATATTTGCATGACAAAGCAAATCCCCCTGTTATTTACAGAGACTTGAAGTCATCCAACATCCTCCTCAATGAGGGCTATCATCCCAAGCTATCAGATTTTGGGCTTGCGAAGCTCGGTCCTGTTGGTGACAAGACTCATGTATCTACACGAGTAATGGGAACATACGGCTACTGTGCTCCAGAGTATGCCATGACAGGCCAACTCACTCTGAAGTCTGATGTATATAGCTTTGGCGTCGTCTTTCTTGAACTTATTACCGGGCGCAAAGCTATTGACAATACCCGTGCCCATGGAGAGCATAATCTCGTTGCCTGGGCACGGCCACTTTTTAAAGACCGTAGGAAGTTTCCAAAAATGGCCGATCCCCTACTTCAAGGGTGTTACCCGATGCGAGGACTCTACCAAGCACTTGCAGTTGCAGCCATGTGTTTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGGGATGTTGTGACTGCTCTCACATACTTGGCCTCACAGACATATGACCCAAATGCAACCAGTCAGAATAGTAGAGTTGGTTCATCGACCCCGAGGAGCGGGGATGGCCAGAGGAGCATGACAGATGGCGTTATGGATAGCCCTGATCGTGGGAGGAGTGGCTTGAATGATGTAGAAAGGCTGGAATCTCAGAGAGACAGCCCTGTAAATACTGGGAGAGCTAGGGAAACTCCAAGGAACCATGACCTAGACAGAGAACGTGCGGTCGCGGAAGCGAAAGTATGGGGCGAGAATTGGAGAGAAAAAAAGAGGGCTAATGCAGTGGGTAGCTTTGATGCTACAAATGAGTAG 1452 0.4676 MGFCEGGFLVSGFDMGGCFPCFGSSNKDKGLKEVAVKKDSFKESSIVAKSNHTNRVSSDKSKSKSGSDPKKEPPVPKEPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLNEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPKMADPLLQGCYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNATSQNSRVGSSTPRSGDGQRSMTDGVMDSPDRGRSGLNDVERLESQRDSPVNTGRARETPRNHDLDRERAVAEAKVWGENWREKKRANAVGSFDATNE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0531 483 SUPERFAMILY Protein kinase-like (PK-like) 76 374 IPR011009 -
Lele45g0531 483 MobiDBLite consensus disorder prediction 383 404 - -
Lele45g0531 483 MobiDBLite consensus disorder prediction 55 77 - -
Lele45g0531 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Lele45g0531 483 CDD STKc_IRAK 106 375 - -
Lele45g0531 483 ProSiteProfiles Protein kinase domain profile. 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0531 483 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Lele45g0531 483 SMART serkin_6 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0531 483 FunFam Serine/threonine-protein kinase PBS1 75 176 - -
Lele45g0531 483 MobiDBLite consensus disorder prediction 46 81 - -
Lele45g0531 483 MobiDBLite consensus disorder prediction 419 433 - -
Lele45g0531 483 PANTHER OS07G0668900 PROTEIN 18 386 - -
Lele45g0531 483 Gene3D Transferase(Phosphotransferase) domain 1 177 396 - -
Lele45g0531 483 MobiDBLite consensus disorder prediction 383 455 - -
Lele45g0531 483 Pfam Protein kinase domain 105 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0531 483 FunFam Serine/threonine-protein kinase PBS1 177 392 - -
Lele45g0531 483 Gene3D Phosphorylase Kinase; domain 1 74 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0531 Lele-ChrLele45 4201253 4205500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0531 18 379 Glycoside Hydrolase AT3G07070 65.289 6.77e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele45g0531 Pkinase 9.4e-46 CL0016