Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0526 ATGTTCTTCGTGAAGGGTTTTACAAGAACCCTATCAATTCGGTCACTCTATAATCTTTTTCAACATGTTTCATCATCATCAACCTTCGCTCCCACGTACAGCACAGCCGCATCTACATCGACTTCAGAGAAACTGTCTTTCACAGTCAACTACCTCATTAGCAAATGTGGATTCTCCCGAGGAACCGCATCGGAGATTTCCCAGCGCATCTCTCTCAAGTCATCGGAAAAACCAGACTTCGTTCTCACCCTTTTCAGAAGCTGTGGTTTTACGAACTCGCAGATTCGCAATGTCATCAAGAAAGCACCGAAATTGCTTCTGAGTAATCCTGGTGAAACCATTTGGCCTAAGCTTGATTTCTTACTATCCAAAGGTGCGTCTTGCTCTCAACTTGTCAACATTGTGACCAGAAGCCCTCGATTCTTATTGAGAAGCTTAGAAAATCATCTAATACCTAGTTATAATTTTGTTAAAGGCTTTGTTGGGTCTGATCAAAGGACTATCACCTCAATCATGCGTAGTAATAGAATAATTTGCTGCGATTTCCTGGAAACTAACATTCAACTCTTGCTTGACATTGGAGTGCCCAAATCTGGCATTGCTGGATTGCTTCATGCGTGGCCTAGTTTGTTTACTATGAACTTAGATAAATTTAGAGTGGCAGCTGAAGGATTAAAGGATAGAGGTTTTGACCCTTCAAAATCAAAATTCATTCCTGCCTTGTATGCCACAAATAAGTTAAGCAAATCCATTTGGAATAGTAAGGTTGAATTCTTTAAGAAGTGGGGCTGGTCTGAAGAAGAGATTGATAGAGCATTTGTACTGCATCCTCATTGTATGTTAAAATCTCTATCTAAGATTAAGGCAGTGATGGAGTTTTTTGTGAATGACATGGGTTGGGACTCCAGTTTGCTTGCTAGTAATCCCATAATTTTTTCAATGAGTTTGGAGAAAAGACTCATTCCAAGGGCTTATGTCGTGCAATATATTCATTCAAGAGGTTTAATTAGGAATGCCTGTATCGTATACCCTTATTATATTACTGAAAAGATATTCCTTGAGAAATATGTCATCCGTTTTGAGGATGAAGCTCCTCGATTATTGAAGTTGTATCAAGAGACAATGAATCGTTCAAGAAAAACTTGA 1146 0.3909 MFFVKGFTRTLSIRSLYNLFQHVSSSSTFAPTYSTAASTSTSEKLSFTVNYLISKCGFSRGTASEISQRISLKSSEKPDFVLTLFRSCGFTNSQIRNVIKKAPKLLLSNPGETIWPKLDFLLSKGASCSQLVNIVTRSPRFLLRSLENHLIPSYNFVKGFVGSDQRTITSIMRSNRIICCDFLETNIQLLLDIGVPKSGIAGLLHAWPSLFTMNLDKFRVAAEGLKDRGFDPSKSKFIPALYATNKLSKSIWNSKVEFFKKWGWSEEEIDRAFVLHPHCMLKSLSKIKAVMEFFVNDMGWDSSLLASNPIIFSMSLEKRLIPRAYVVQYIHSRGLIRNACIVYPYYITEKIFLEKYVIRFEDEAPRLLKLYQETMNRSRKT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0526 381 FunFam Mitochondrial transcription termination factor-like 146 364 - -
Lele45g0526 381 PANTHER CGI-12 PROTEIN-RELATED 44 359 IPR003690 GO:0003690|GO:0006355
Lele45g0526 381 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Lele45g0526 381 SMART mt_12 168 196 IPR003690 GO:0003690|GO:0006355
Lele45g0526 381 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Lele45g0526 381 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Lele45g0526 381 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Lele45g0526 381 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Lele45g0526 381 Pfam mTERF 82 217 IPR003690 GO:0003690|GO:0006355
Lele45g0526 381 Pfam mTERF 183 338 IPR003690 GO:0003690|GO:0006355
Lele45g0526 381 Gene3D Transcription termination factor 3, mitochondrial 162 364 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0526 Lele-ChrLele45 4155292 4156437 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele45g0526 mTERF 2.5e-19 No_clan