Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0525 ATGTCCATGTCCACCTCTAGAACCCTAGATTCTTCTTCCTCCTCCTCCTCATCATTCAAAGGCTATGAAGCAAACCAGACCCAGATGGTTCTGTCTCTTCTTCAGAGAAACACATCTCCTTGTGATGGTGAGAAAAGAGGGAGAAGAAAGCAATCAGAACCGGGAAGGTTCCTTGGTGTCAGAAGAAGACCTTGGGGAAGATATGCTGCAGAAATAAGGGACCCCACAACAAAAGAAAGGCATTGGCTTGGAACTTTTGACACTGCTCAAGAAGCTGCTCTGGCTTATGACAGAGCTGCTCTCTCCATGAAAGGAAGCCAAGCAAGAACAAATTTCATATACTCTGACACTAACACTACTTTTCACTCTCTTCTTTCTCCTTCTTTAGATGTTCATCAACCACTTTTACCAACTTGTTATCAGAATAGTGCTAGTTCAGTAGTTTCTGATATGTCTCATCTTCATCAGATTGAGCCTAATAATAATAATAATCTGATGAACAATGGCATGCCTGAAACTGAGAACTTTTTCTTGTTTTCCAGTGATTATTCTTCTTCTAACTCAGGATACTTGGAATGTGTGGTTCCTGATAACTGTCTGAGAAGTTCAAGTGATCACCAAAAGGGTCAATCTCAACAACAACAACAAGGAATGATCAAAATGCCAACAGTGGGATGTGAAAGTTCAGATTTTTATTCATACCCAGATGAAATCTCTCAGGGATTTTCATGGGATTCTGATTGCAGTGAGCTTTCTGCTATAATCGACAGAAACCCAATAATGAGGGTTGAAGAAGATGATGGTGGGTGCTTCTTTGGGAGTTCTTCAAGCTATGGTGGGCTCATGATGACTGATCAATATGCTTCTGTTTCTGCTTCTGCTTCAGCTTCAGCTTCTTCTTCTTCTTCTTCTTCTTCATATGCCTTTGGAGATGTTGATATGGGATCCTCAATGTTCTGA 960 0.4094 MSMSTSRTLDSSSSSSSSFKGYEANQTQMVLSLLQRNTSPCDGEKRGRRKQSEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFIYSDTNTTFHSLLSPSLDVHQPLLPTCYQNSASSVVSDMSHLHQIEPNNNNNLMNNGMPETENFFLFSSDYSSSNSGYLECVVPDNCLRSSSDHQKGQSQQQQQGMIKMPTVGCESSDFYSYPDEISQGFSWDSDCSELSAIIDRNPIMRVEEDDGGCFFGSSSSYGGLMMTDQYASVSASASASASSSSSSSSYAFGDVDMGSSMF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0525 319 CDD AP2 56 112 IPR001471 GO:0003700|GO:0006355
Lele45g0525 319 ProSiteProfiles AP2/ERF domain profile. 56 113 IPR001471 GO:0003700|GO:0006355
Lele45g0525 319 MobiDBLite consensus disorder prediction 41 57 - -
Lele45g0525 319 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 36 251 - -
Lele45g0525 319 Gene3D AP2/ERF domain 56 114 IPR036955 GO:0003700|GO:0006355
Lele45g0525 319 MobiDBLite consensus disorder prediction 37 57 - -
Lele45g0525 319 Pfam AP2 domain 59 105 IPR001471 GO:0003700|GO:0006355
Lele45g0525 319 SUPERFAMILY DNA-binding domain 57 114 IPR016177 GO:0003677
Lele45g0525 319 PRINTS Ethylene responsive element binding protein signature 79 95 IPR001471 GO:0003700|GO:0006355
Lele45g0525 319 PRINTS Ethylene responsive element binding protein signature 57 68 IPR001471 GO:0003700|GO:0006355
Lele45g0525 319 SMART rav1_2 56 119 IPR001471 GO:0003700|GO:0006355
Lele45g0525 319 MobiDBLite consensus disorder prediction 1 22 - -
Lele45g0525 319 FunFam Ethylene-responsive transcription factor 2 56 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0525 Lele-ChrLele45 4141595 4142554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0525 3 319 AP2-EREBP Transcription Factor Family AT5G18560 37.795 1.49e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele45g0525 AP2 1.3e-12 CL0081