Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0504 ATGTGGCAGAATCATCATCCCCATAAGTCTTCTTCTTCTGCTTCCTCTTCTTGTTTAAGAGATTCTATTGTGGCTCTTGAAGCTGATATTCAGCATGCCAATACCCTTGCAGCGTCCCTACCAGGAGGTTATGGTGGGGACCATATTCACATGAAACTATCATACAGTTCTTTGGCTCCTTTATTCTTTCGTTTGATCCAATGGCTGGATTTTACTTGTACCGATGCTCTCCCCACTTATCTTGGCTTATTCCAGATCCTCATTTACAAGGTGTACGGGGATGGAATGCCATCCTTATCCTCCAAAGAAAGAAGAGCCTCTCTCAAGGATTTTTATGGTGTAATATACCCATCACTGAGGCAACTTGAAGGAGAGTTTAAAGATGAAAATAGAAATAATTGCAGACAAGTGGCGAGTAGAAAGAGCCCAAAGAAAGGGTTTGAAAATAAAGAAGAAGCTGAGTTGAGAGATGATGAAGAATGTGGAATCTGCATGGAGATGAACATGATCATGATCCTCCCTAGTTGTGGCCATTCCTTGTGCATCACCTGCTTCCATGACTGGAAAGTGAGATCAGAGTCATGCCCATTTTGCAGAGGGAGCCTGAAGAGGGTGAGTTCAACAGATCTATGGGTTGTGATAGACGACACTGAAGTGGTGGATAGACTCATACTCGCAAAAGACAACCTCAGACGCTTCTATCTTTACATTCACTCACTTCCTCTTCTTACTCATCCTGATCCTCATGTCTTCATCTTCAACTATATGCTTTGA 774 0.4264 MWQNHHPHKSSSSASSSCLRDSIVALEADIQHANTLAASLPGGYGGDHIHMKLSYSSLAPLFFRLIQWLDFTCTDALPTYLGLFQILIYKVYGDGMPSLSSKERRASLKDFYGVIYPSLRQLEGEFKDENRNNCRQVASRKSPKKGFENKEEAELRDDEECGICMEMNMIMILPSCGHSLCITCFHDWKVRSESCPFCRGSLKRVSSTDLWVVIDDTEVVDRLILAKDNLRRFYLYIHSLPLLTHPDPHVFIFNYML 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0504 257 Pfam Zinc finger, C3HC4 type (RING finger) 158 204 - -
Lele45g0504 257 FunFam RING/U-box superfamily protein 142 208 - -
Lele45g0504 257 SUPERFAMILY RING/U-box 151 204 - -
Lele45g0504 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 222 IPR013083 -
Lele45g0504 257 ProSiteProfiles Zinc finger RING-type profile. 161 199 IPR001841 -
Lele45g0504 257 PANTHER RING FINGER PROTEIN 41, 151 18 252 - -
Lele45g0504 257 SMART ring_2 161 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0504 Lele-ChrLele45 3915124 3921142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0504 143 205 C3H Transcription Factor Family AT2G17450 37.500 2.34e-06 45.1