Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0496 ATGTATTTAACGGAGAAACCCCGACCCATTGATTTCTATAAAGAAGAAGCAACCCCAGATATGATGATCGAGGTTACGTCCAATGCCGAACTCCCTCCTCCTCCGCCGCTTCAACAACCTCTGCAACATCTAATGATCCTCGGTGAAAGTAGCGGCGATGACCACGAGGTTGAAATTAAGGCGCCAAAGAAGCGAGCTGAGACTTGGGTACAAAACGAGACGCGAAATCTCATTGCTTTTCGCCGTGAGATGGATGGGCTGTTCAGTACCTCCAAATCTAATAAGCACTTGTGGGAACAGATATCAGCGAAGATGAGAGATAAGGGATTTGATCGATCGCCGACTATGTGTACGGATAAGTGGAGAAATCTGCTAAAGGAGTTTAAGAAGGTGAAGTATCAAGATAGGGGAGCTGGGTCCGCTAAGATGTCGTATTACAAAGACATTGAGGAGATCTTGAAAGAGAGGAGCAAGAGTGTGTGCTACAAGAGCCCTGCTCCTCCAAAGGTTGAATCCTATATGCAATTCTCTGATAAAGGTATGGAGGGTACCAGCATTTCTTTTGGGCCTGTTGAAGGTTCAGCCACTGGCAGATCAACACTCAATCTTGAAAACCGTTCGGATCATGATGAACATCCTCTTGCAATTACTGCAAATGATACAGTTGGCACAAGTGGAGTTCCTCCTTCGAGTTGGAGAGAAACTCCTATAAGCGGTGGGGAAGGTCAATCATGTTGTGGGAGGGTCATAACAGTCAAATGGGGCGATTACAGAAGAAGAATAGGCATTGATGGTACTTCAGAAGCCATCAAAGAGGCAATAAGAGCTGATTTTAGGTTGAGAACCAAACGCTTGTTTTGGTTGGAGGATGAATACCAGATAATAAGGAGTCTTGACCGAGATATGCCTTTAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATGCCTCTATGATGAGTCTGACCAAATTCATGTTCATACTGAAGAGAATATTTTTTACACCGAGGAAGATCACCGTGATTTTCTGGTACGGCGGGGCTGGACATGTCTGAGGGAACTTGATGGACATAGAAACATTGATAACTTGGATGATCTTCAACCTGGTGCCATGTACCGTGGGGGGCCTTTGTATATATATCTCTTTGACATTCATGCGGCACAATCCTGGGGTTAG 1188 0.447 MYLTEKPRPIDFYKEEATPDMMIEVTSNAELPPPPPLQQPLQHLMILGESSGDDHEVEIKAPKKRAETWVQNETRNLIAFRREMDGLFSTSKSNKHLWEQISAKMRDKGFDRSPTMCTDKWRNLLKEFKKVKYQDRGAGSAKMSYYKDIEEILKERSKSVCYKSPAPPKVESYMQFSDKGMEGTSISFGPVEGSATGRSTLNLENRSDHDEHPLAITANDTVGTSGVPPSSWRETPISGGEGQSCCGRVITVKWGDYRRRIGIDGTSEAIKEAIRADFRLRTKRLFWLEDEYQIIRSLDRDMPLGNYTLHLDEGMAIKVCLYDESDQIHVHTEENIFYTEEDHRDFLVRRGWTCLRELDGHRNIDNLDDLQPGAMYRGGPLYIYLFDIHAAQSWG 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0496 395 ProSiteProfiles Myb-like domain profile. 61 125 IPR001005 -
Lele45g0496 395 PANTHER FI21293P1 49 370 - -
Lele45g0496 395 Gene3D - 69 130 - -
Lele45g0496 395 MobiDBLite consensus disorder prediction 218 238 - -
Lele45g0496 395 Pfam Myb/SANT-like DNA-binding domain 68 152 IPR044822 -
Lele45g0496 395 SMART sant 65 127 IPR001005 -
Lele45g0496 395 CDD GT1 67 132 - -
Lele45g0496 395 MobiDBLite consensus disorder prediction 210 240 - -
Lele45g0496 395 FunFam trihelix transcription factor GT-1 69 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0496 Lele-ChrLele45 3856635 3860781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0496 20 378 Trihelix Transcription Factor Family AT3G25990 65.676 5.22e-167 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele45g0496 Myb_DNA-bind_4 4.1e-19 CL0123