Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0486 ATGGCTGCTGGGAGGCATGGAGGCTATCGCGACAACGAATTTAGGGATCGTGAGTCCAGTTTTGAAGTCTCTAGGCGGGGTTATGCTAATTCTGAAGAAGATTACGATCGGATTAGGCCTGGTAGCCGCGATAGTGTGAGAGGTGGGAACACGGGTTCAAGAGATAGGATTAGATTGAGACAGAAGGATATAAGGGAGAGAGGGGCGATGAATGGCAGCTACCGCTCATCTTCAAGTAGGAGTAACTCGGGGAGCAGCAGTGGTGGTCTCGGTCCCAGAAAATGTGTTTTTTCTGTCAAGGCAACGGATAGGGAGCCGGGTGAGCTTTCCAGTGACAGCGGCTCTGATGAAGCTATTGAATCAGAGCCACAGGGGAAAGGCTTTGAGGTTGCTAAGGTTGAAAAAAATGGGACTCAGTCTCCATTGGAGAGGAAAAGAAAATTTTCACCAATAGTGTGGGATCGGGATGACAAAGAAGTTAATGTTTCATCCAAACTTAAGGTGTCCACAACTTCGACTACTCTTCCTCCTCCACCACCTTTACCAAAAGCATTCCGTCAGTCACCTCATGCTCCATGTGGTGGAGTGGAGATACATCCCGTGAACGATAGAGAAACTGAGAGCCTTGCGGTGCCTACAGCAGTTAAACCTCCTCTGTCCTCTGAGTCAGTTCAGGATGTTGATACTGAGTCTACCGAGAGAGCGCTTCCTTTGTCGCTGGATCAAAATTTGGGCAATGATCTGGAGGCTGAGCAGCCAAAGGGTGATGACTATGTGCCTATGCATAACATATCATCTTCAAGATGGGCAGCTGGGGATAACTCTCCTGGGGATGAAGGTGAAATTATAGATGATGATGAACTTTCTAAAAAGAAGAGGAGGTTGTCACCTGAGTTATTGAAAACCAGAGTGCGAAACAAGCTGTTGAGCCCAGAGGAATCAAAAAGAGATGGCTATGAAGGAGCTAGAGCTAACTCATCTGAATCTGAAGAAAGAGGTAGCCATGGTAAAATCTCCACTGGGGATGATCATATTAGTATTGGATCTGACAAGGATGACTATATGGATATTGATGGTCAAGTTGTCAAAAGCGAAACAACTGTTAGCCACTCAGATACTGCTTCTGAAGATGAAGATGATGGACGGGAAACTCCAGAGCCTCCAACTCCACCACAAAGAGTTGTCAACATGCTCCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATAGATGAAGGAACATATGGTGTTGTATATAGGGCCAAAGATAAGAAGACTGGGGAAATTGTTGCATTGAAGAAGGTGAAGATGGAGAAGGAAAAAGAGGGCTTCCCGCTGACTTCTCTAAGGGAAATAAATATTCTACTTTCTGTTCACCACCCATCAATAGTTGATGTTAAAGAAGTAGTTGTAGGTGGCAACCTTGATAGTATTTTTATGGTGATGGAATACATGGAACATGATCTTAAAGGACTGATGGAGGCAATGAAGCAGCCATTCAGCCAGAGTGAAGTGAAGTGCCTTGTGCTCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGGCAACTGGGTGCTTCATAGGGATTTGAAGACCTCTAACCTCCTTTTGAATAATAGGGGTGAATTAAAAATTTGTGATTTTGGGTTGGCTCGTCAGTATGGGAGTCCATTGAAAACATACACGCATCTGGTTGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGACAAAACAGTATTCGACGGCCATTGACATGTGGTCTTTGGGTTGTATAATGGCTGAGCTATTGTCCAAAGAACCATTATTCAACGGGAAGACTGAATTTGATCAAATTGACAAGATTTTCCGTATTCTTGGGACACCAAATGAAACAATTTGGCCTGGGTTCTCTAAATTATCTGAAGTGAAAGTCAATTTTGTCAAGCATCAGTATAACCTTCTGCGCAAAAAATTTCCTGCCACATCTTTCACTGGATCCCCAGTTCTCTCTGATTCTGGATTTGATCTGTTGAACAAGCTTCTTACTTATGACCCTGAGAAGAGGATCACGGCTGATGAAGCTCTCAATCATGAGTGGTTTCGTGAAGTTCCTCTTCCCAAGTCTAAAGAATTCATGCCTACTTTTCCTGCTCGACATGCTCAAGAGAGGCGGAATCGGAAACTATTAAAGAATCCTGATCCTTTGGAGGAGCAGCGTCGAAAGGAGTTGCAGCAGGGTGAATTAGGGACTGGTGGTATTTTTGGCTGA 2262 0.4443 MAAGRHGGYRDNEFRDRESSFEVSRRGYANSEEDYDRIRPGSRDSVRGGNTGSRDRIRLRQKDIRERGAMNGSYRSSSSRSNSGSSSGGLGPRKCVFSVKATDREPGELSSDSGSDEAIESEPQGKGFEVAKVEKNGTQSPLERKRKFSPIVWDRDDKEVNVSSKLKVSTTSTTLPPPPPLPKAFRQSPHAPCGGVEIHPVNDRETESLAVPTAVKPPLSSESVQDVDTESTERALPLSLDQNLGNDLEAEQPKGDDYVPMHNISSSRWAAGDNSPGDEGEIIDDDELSKKKRRLSPELLKTRVRNKLLSPEESKRDGYEGARANSSESEERGSHGKISTGDDHISIGSDKDDYMDIDGQVVKSETTVSHSDTASEDEDDGRETPEPPTPPQRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSVHHPSIVDVKEVVVGGNLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLVLQLLEGVKYLHGNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKTYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQIDKIFRILGTPNETIWPGFSKLSEVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITADEALNHEWFREVPLPKSKEFMPTFPARHAQERRNRKLLKNPDPLEEQRRKELQQGELGTGGIFG 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0486 753 PANTHER CELL DIVISION PROTEIN KINASE 405 704 - -
Lele45g0486 753 MobiDBLite consensus disorder prediction 160 393 - -
Lele45g0486 753 ProSiteProfiles Protein kinase domain profile. 407 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0486 753 MobiDBLite consensus disorder prediction 1 148 - -
Lele45g0486 753 Pfam Protein kinase domain 407 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0486 753 SUPERFAMILY Protein kinase-like (PK-like) 399 704 IPR011009 -
Lele45g0486 753 SMART serkin_6 407 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0486 753 Gene3D Transferase(Phosphotransferase) domain 1 490 730 - -
Lele45g0486 753 MobiDBLite consensus disorder prediction 718 742 - -
Lele45g0486 753 Gene3D Phosphorylase Kinase; domain 1 392 489 - -
Lele45g0486 753 MobiDBLite consensus disorder prediction 71 89 - -
Lele45g0486 753 FunFam Cyclin-dependent kinase G-2 490 729 - -
Lele45g0486 753 MobiDBLite consensus disorder prediction 218 239 - -
Lele45g0486 753 FunFam cyclin-dependent kinase G-2 isoform X1 392 489 - -
Lele45g0486 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Lele45g0486 753 MobiDBLite consensus disorder prediction 718 753 - -
Lele45g0486 753 CDD STKc_CDC2L1 401 698 IPR045267 GO:0004674|GO:0005524|GO:0006468
Lele45g0486 753 MobiDBLite consensus disorder prediction 284 359 - -
Lele45g0486 753 MobiDBLite consensus disorder prediction 8 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0486 Lele-ChrLele45 3773765 3776716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0486 398 744 Core Cell Cycle Gene Families AT5G10270 44.533 6.68e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Lele45g0486 Pkinase 3.9e-75 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0486 45 3773765 3776716 Lele45g0486 45 3773765 3776716 ECH
Lele45g0486 45 3773765 3776716 Lele47g0914 47 15302192 15309028 hybridization
Lele45g0486 45 3773765 3776716 Lele48g0978 48 14863685 14866629 hybridization