Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0463 ATGCGCACTGAGATCATTATCAGAGCCACGCGAACCCAGAATGTGCTTGGTGAGAAGGGTAGGAGAATCAGGGAACTGACCTCGGTTGTACAGAAGAGATTTAAGTTCCCGGAGAACAGCGTGGAGTTATATGCTGAGAAGGTGAACAACAGGGGTCTTTGTGCTATTGCTCAGGCCGAGTCTCTTCGCTATAAGCTTCTTGGTGGACTCGCTGTGCGGAGGGCATGCTATGGTGTTTTAAGATTTGTTATGGAAAGTGGAGCAAAGGGATGTGAGGTCATTGACTATATTGATTCTGCTGTAAGACACGTACTCCTCAGACAGGGGGTTCTTGGCATCAAGGTCAGGATCATGCTTGATTGGGACCCTAAGGGAAAGCAGGGTCCTAAAACCCCTCTTCCTGATATTGTCACAATCCGTCCCCCAAAGAAGGAAGAAGAATACAACCGGCCTGCTGCTGTTGTGGCAGTTGATATTGATGTCCCCGTCGTGCCCGTGGCTTGA 504 0.494 MRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIDYIDSAVRHVLLRQGVLGIKVRIMLDWDPKGKQGPKTPLPDIVTIRPPKKEEEYNRPAAVVAVDIDVPVVPVA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0463 167 Gene3D - 1 49 IPR015946 -
Lele45g0463 167 Gene3D - 95 149 IPR036419 -
Lele45g0463 167 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 94 131 - -
Lele45g0463 167 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 1 56 IPR009019 GO:0003723
Lele45g0463 167 Pfam KH domain 2 50 IPR004044 GO:0003723
Lele45g0463 167 SUPERFAMILY Ribosomal protein S3 C-terminal domain 50 120 IPR036419 -
Lele45g0463 167 Gene3D - 50 94 IPR036419 -
Lele45g0463 167 CDD 40S_S3_KH 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0463 Lele-ChrLele45 3594209 3596383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0463 1 166 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 71.134 3.66e-93 269